CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_349586
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_349586
T330155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA07125
Sox
66
131
PTRSPNAFIIYRKVFFKTIKNEGYVLPMTSISSMASQSWEQEPEEIKNYYKGLAKEAFNYRNERFP
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_103050
Neurospora tetrasperma
NEUTE1DRAFT_103050
I
0.417
GLOINDRAFT_322903
Rhizophagus irregularis
GLOINDRAFT_322903
N
0.526
GLOINDRAFT_92937
Rhizophagus irregularis
GLOINDRAFT_92937
N
0.428
GLOINDRAFT_374
Rhizophagus irregularis
GLOINDRAFT_374
N
0.423
GLOINDRAFT_36347
Rhizophagus irregularis
GLOINDRAFT_36347
N
0.562
GLOINDRAFT_36235
Rhizophagus irregularis
GLOINDRAFT_36235
N
0.474
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.420
GLOINDRAFT_35702
Rhizophagus irregularis
GLOINDRAFT_35702
N
0.548
GLOINDRAFT_348398
Rhizophagus irregularis
GLOINDRAFT_348398
N
0.458
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.467
GLOINDRAFT_342407
Rhizophagus irregularis
GLOINDRAFT_342407
N
0.546
GLOINDRAFT_341245
Rhizophagus irregularis
GLOINDRAFT_341245
N
0.432
GLOINDRAFT_340908
Rhizophagus irregularis
GLOINDRAFT_340908
N
0.508
GLOINDRAFT_336409
Rhizophagus irregularis
GLOINDRAFT_336409
N
0.431
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.494
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.449
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.579
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.437
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.459
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.483
GLOINDRAFT_209293
Rhizophagus irregularis
GLOINDRAFT_209293
N
0.541
GLOINDRAFT_15291
Rhizophagus irregularis
GLOINDRAFT_15291
N
0.425
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.418
GLOINDRAFT_14857
Rhizophagus irregularis
GLOINDRAFT_14857
N
0.419
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.492
GLOINDRAFT_14799
Rhizophagus irregularis
GLOINDRAFT_14799
N
0.576
GLOINDRAFT_14705
Rhizophagus irregularis
GLOINDRAFT_14705
N
0.420
GLOINDRAFT_13874
Rhizophagus irregularis
GLOINDRAFT_13874
N
0.462
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.566