CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_374
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_374
T330167_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA09292
Sox
4
64
PVRHMNAFICYRKDNIDHGSKLKMTDYSRFIAPKWQDESDLFKRKYYQAAAKDYVEKEMAS
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.447
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.429
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.425
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.423
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.423
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.419