KLLA0_E18481g (Kluyveromyces lactis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 KLLA0_E18481g T330796_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.580 0.681
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.580 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAG99872 Sox 317 385
CAG99872 Sox 390 458

Links

Other Sox family TFs
Other Kluyveromyces lactis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK05732.1 Cannabis sativa PK05732.1 D
Pm014775 Prunus mume Pm014775 I
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I
MDP0000244794 Malus domestica MDP0000244794 I
Lus10001149.g Linum usitatissimum Lus10001149.g I
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I
Cucsa.058770 Cucumis sativus Cucsa.058770 I
cassava15362.m1 Manihot esculenta cassava15362.m1 I
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I
TCM_030248 Theobroma cacao TCM_030248 I
TCM_001942 Theobroma cacao TCM_001942 I
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I
PGSC0003DMG400000922 Solanum tuberosum PGSC0003DMG400000922 I