LotgiG109021 (Lottia gigantea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LotgiG109021 T330930_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.425 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP109021 Sox 11 79

Links

Other Sox family TFs
Other Lottia gigantea TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FOXN3 Homo sapiens ENSG00000053254 D
FOXN3 Tursiops truncatus ENSTTRG00000000817 I
FOXN3 Ochotona princeps ENSOPRG00000002931 I
ches1 Oryzias latipes ENSORLG00000010729 I
ENSPANG00000016397 Papio anubis ENSPANG00000016397 I
FOXN3 Procavia capensis ENSPCAG00000013761 I
ENSPFOG00000001305 Poecilia formosa ENSPFOG00000001305 I
ENSPSIG00000013517 Pelodiscus sinensis ENSPSIG00000013517 I
FOXN3 Pan troglodytes ENSPTRG00000006614 I
Foxn3 Rattus norvegicus ENSRNOG00000004709 I
ENSSHAG00000010850 Sarcophilus harrisii ENSSHAG00000010850 I
FOXN3 Sus scrofa ENSSSCG00000002429 I
ENSSTOG00000014643 Ictidomys tridecemlineatus ENSSTOG00000014643 I
FOXN3 Tupaia belangeri ENSTBEG00000003603 I
ENSTGUG00000012441 Taeniopygia guttata ENSTGUG00000012441 I
ches1 Takifugu rubripes ENSTRUG00000003497 I
FOXN3 Otolemur garnettii ENSOGAG00000001733 I
GK19775 Drosophila willistoni FBgn0221773 I
L798_02484 Zootermopsis nevadensis L798_02484 I
LotgiG138633 Lottia gigantea LotgiG138633 I
YQE_02614 Dendroctonus ponderosae YQE_02614 I
YQE_02630 Dendroctonus ponderosae YQE_02630 I
YQE_03399 Dendroctonus ponderosae YQE_03399 I
ENSP00000261302 Macaca fascicularis ENSP00000261302 I
Ogr01321 Ophisaurus gracilis Ogr01321 I
gw.10.104.1 Branchiostoma floridae gw.10.104.1 I
gw.384.13.1 Branchiostoma floridae gw.384.13.1 I
Sakowv30028653m.g Saccoglossus kowalevskii Sakowv30028653m.g I
foxn3 Xenopus tropicalis XB-GENE-483117 I
foxn3.L Xenopus laevis XB-GENE-6448222 I
foxn3.S Xenopus laevis XB-GENE-864945 I
BGLB008394 Biomphalaria glabrata BGLB008394 I
ENSFALG00000012332 Ficedula albicollis ENSFALG00000012332 I
FOXN3 Anolis carolinensis ENSACAG00000012791 I
ENSAMEG00000001627 Ailuropoda melanoleuca ENSAMEG00000001627 I
ENSAMXG00000009484 Astyanax mexicanus ENSAMXG00000009484 I
ENSAMXG00000018596 Astyanax mexicanus ENSAMXG00000018596 I
ENSAPLG00000009060 Anas platyrhynchos ENSAPLG00000009060 I
FOXN3 Canis familiaris ENSCAFG00000011068 I
FOXN3 Callithrix jacchus ENSCJAG00000017620 I
FOXN3 Cavia porcellus ENSCPOG00000004079 I
ENSCSAVG00000007298 Ciona savignyi ENSCSAVG00000007298 I
foxn3 Danio rerio ENSDARG00000012833 I
ches1 Danio rerio ENSDARG00000043553 I
FOXN3 Dasypus novemcinctus ENSDNOG00000003188 I
ENSDORG00000007387 Dipodomys ordii ENSDORG00000007387 I
FOXN3 Equus caballus ENSECAG00000026917 I
ENSEEUG00000008958 Erinaceus europaeus ENSEEUG00000008958 I
ENSONIG00000001158 Oreochromis niloticus ENSONIG00000001158 I
FOXN3 Felis catus ENSFCAG00000012929 I
FOXN3 Gallus gallus ENSGALG00000010665 I
FOXN3 Gorilla gorilla ENSGGOG00000023852 I
ENSLACG00000015298 Latimeria chalumnae ENSLACG00000015298 I
FOXN3 Loxodonta africana ENSLAFG00000016005 I
ENSLOCG00000008977 Lepisosteus oculatus ENSLOCG00000008977 I
FOXN3 Meleagris gallopavo ENSMGAG00000013026 I
FOXN3 Myotis lucifugus ENSMLUG00000008780 I
FOXN3 Macaca mulatta ENSMMUG00000019898 I
ENSMPUG00000008174 Mustela putorius furo ENSMPUG00000008174 I
Foxn3 Mus musculus ENSMUSG00000033713 I
ENSNLEG00000016989 Nomascus leucogenys ENSNLEG00000016989 I
FOXN3 Oryctolagus cuniculus ENSOCUG00000004392 I
CGI_10011126 Crassostrea gigas CGI_10011126 I