CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUTE1DRAFT_125621
(
Neurospora tetrasperma
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
NEUTE1DRAFT_125621
T331501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGO52061
Sox
1005
1063
QLFFFEEQIVIQRQFPSWQSGAINAELWRRWTTMASSRQESYVSRATVAQNQAQTQAHP
EGO52061
Sox
1092
1146
YYFSTQMGSLRAKHPTYSHQLLLDKISTAWSSLPRTHREWFNKQALLQKQQQPQL
EGO52061
Sox
1366
1425
TSPPVSGYEVFAKEMEGRLRKRNSGASAASLKSVIQRRWEAMSETHRAVYATMALDKAKS
EGO52061
Sox
1470
1530
PSRKYDGFEYYLNTEGLNVRRKYPEYSYDQVVEATKRQWDALTSTARSNYSNKAFAAAQHP
EGO52061
Sox
1641
1700
DGFTWFLNSEGVDYKKQNPNVAYSDLRTAMYARWCGMDGIERSKFEKVASTLKQSAEGRE
EGO52061
Sox
1736
1794
DGFTWFYNSVGVSLKKQIPDIGYDEHRTEIYSQWSGLKAMQRREYEKVAYTLRQSAQGR
EGO52061
Sox
1874
1914
TSYDSVVAKMKARWKSMSAVERLAYEDGAKAARMSGRRQVT
EGO52061
Sox
1976
2032
GGFNWFLNTWGHAFKQENRELDYELVVTITESRWERMTHEERRDFEDKAKRMRVNVA
Links
Other
Sox
family TFs
Other
Neurospora tetrasperma
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_00237
Phytophthora parasitica
F443_00237
N
fgenesh_scip_prom.28083.7635
Phytophthora lateralis
fgenesh_scip_prom.28083.7635
N
HpaG800559
Hyaloperonospora arabidopsidis
HpaG800559
N
maker-pag1_scaffold_241-snap-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.7
N
maker-pir_contig_2086-snap-gene-0.1
Pythium irregulare
maker-pir_contig_2086-snap-gene-0.1
N
maker-piw_contig_1009-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1009-snap-gene-0.3
N
maker-pve_contig_244-snap-gene-0.13
Pythium vexans
maker-pve_contig_244-snap-gene-0.13
N
Phyra75931
Phytophthora ramorum
Phyra75931
N
PITG_05745
Phytophthora infestans
PITG_05745
N
PYU1_G005003
Pythium ultimum
PYU1_G005003
N
e_gw1.0.353.1
Phytophthora capsici
e_gw1.0.353.1
N