CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_241-snap-gene-0.7
(
Pythium aphanidermatum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
maker-pag1_scaffold_241-snap-gene-0.7
T320478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000019079
RWP-RK
170
218
NITFPMLQEHFSKPLKDAANHFGVCTTLLKKICRKNGISSWPYRHIIGL
Links
Other
RWP-RK
family TFs
Other
Pythium aphanidermatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_5270-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5270-fgenesh-gene-0.0
N
0.857
maker-pir_contig_2086-snap-gene-0.1
Pythium irregulare
maker-pir_contig_2086-snap-gene-0.1
N
0.755
Physo132524
Phytophthora sojae
Physo132524
N
0.755
F443_00237
Phytophthora parasitica
F443_00237
N
0.735
fgenesh_scip_prom.28083.7635
Phytophthora lateralis
fgenesh_scip_prom.28083.7635
N
0.735
Phyra75931
Phytophthora ramorum
Phyra75931
N
0.735
PYU1_G005003
Pythium ultimum
PYU1_G005003
N
0.735
e_gw1.0.353.1
Phytophthora capsici
e_gw1.0.353.1
N
0.735
HpaG800559
Hyaloperonospora arabidopsidis
HpaG800559
N
0.714
maker-pve_contig_244-snap-gene-0.13
Pythium vexans
maker-pve_contig_244-snap-gene-0.13
N
0.714