Ppa-hmg-1.2 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA02361 T332169_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA02361 Sox 33 102
PPA02361 Sox 118 186

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035910 Oryza indica BGIOSGA035910 N
F775_23188 Aegilops tauschii F775_23188 N
F775_23986 Aegilops tauschii F775_23986 N
LPERR12G14660 Leersia perrieri LPERR12G14660 N
OBART12G17540 Oryza barthii OBART12G17540 N
OGLUM09G03810 Oryza glumaepatula OGLUM09G03810 N
OMERI12G12170 Oryza meridionalis OMERI12G12170 N
ONIVA03G41680 Oryza nivara ONIVA03G41680 N
OPUNC12G15840 Oryza punctata OPUNC12G15840 N
ORUFI08G04050 Oryza rufipogon ORUFI08G04050 N
ORUFI12G19420 Oryza rufipogon ORUFI12G19420 N
PRUPE_ppa015272mg Prunus persica PRUPE_ppa015272mg N
Traes_4AL_2E26DE3F6 Triticum aestivum Traes_4AL_2E26DE3F6 N