CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RHTO_02497
(
Rhodosporidium toruloides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
RHTO_02497
T332337_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMS20549
Sox
97
165
PKRPPSAYIEYQNSVREDFRKQYSDLPYSEVLKKIGSMWQSMTDAEKKSWQDITEQKKSQYMKAKELYE
Links
Other
Sox
family TFs
Other
Rhodosporidium toruloides
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_06955
Trichosporon asahii
A1Q1_06955
N
0.449
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.427
DACRYDRAFT_44392
Dacryopinax sp
DACRYDRAFT_44392
N
0.479
M407DRAFT_143647
Tulasnella calospora
M407DRAFT_143647
N
0.452
M408DRAFT_53001
Serendipita vermifera
M408DRAFT_53001
N
0.485
M408DRAFT_54305
Serendipita vermifera
M408DRAFT_54305
N
0.485
MVLG_00015
Microbotryum violaceum
MVLG_00015
N
0.473
PIIN_07506
Piriformospora indica
PIIN_07506
N
0.468
V565_036270
Rhizoctonia solani
V565_036270
N
0.496
gw1.11.235.1
Sporobolomyces roseus
gw1.11.235.1
N
0.448
estExt_fgeneshTM_pg.C_110237
Tremella mesenterica
estExt_fgeneshTM_pg.C_110237
N
0.417