CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_54305
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_54305
T331045_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM20921
Sox
9
76
PKRPPSAYLLYQNEVRKDIREQNPDMKYPEVLQEISKMWTALSDEEKKPYLDATGLAKAEYDKVKEEY
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M408DRAFT_53001
Serendipita vermifera
M408DRAFT_53001
N
0.741
PIIN_07506
Piriformospora indica
PIIN_07506
N
0.566
L804_03290
Cryptococcus gattii
L804_03290
N
0.500
estExt_fgeneshTM_pg.C_110237
Tremella mesenterica
estExt_fgeneshTM_pg.C_110237
N
0.491
M407DRAFT_143647
Tulasnella calospora
M407DRAFT_143647
N
0.485
RHTO_02497
Rhodosporidium toruloides
RHTO_02497
N
0.485
CNE04220
Cryptococcus neoformans
CNE04220
N
0.473
V565_036270
Rhizoctonia solani
V565_036270
N
0.472
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.470
DACRYDRAFT_44392
Dacryopinax sp
DACRYDRAFT_44392
N
0.463
TMUE_s0002021000
Trichuris muris
TMUE_s0002021000
N
0.450
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.437
A1Q1_06955
Trichosporon asahii
A1Q1_06955
N
0.432
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.430
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.425
NV15871
Nasonia vitripennis
NV15871
N
0.421
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.417