Cmyd_10010094 (Chelonia mydas)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Cmyd_10010094 T333663_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.555 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10010094 Sox 155 223

Links

Other Sox family TFs
Other Chelonia mydas TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo04593s010 Brassica oleracea Bo04593s010 N
Bo1g053290 Brassica oleracea Bo1g053290 N
Bo3g023180 Brassica oleracea Bo3g023180 N
Bo9g165450 Brassica oleracea Bo9g165450 N
Thhalv10012177m.g Eutrema salsugineum Thhalv10012177m.g N