CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm010381
(
Prunus mume
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Pm010381
T333835_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm010381
Sox
135
165
PKKPPTAFFYFLEDFRKEFQEQNPGVKSMRD
Pm010381
Sox
161
189
KSMRDEKVQYYDIATEKRAEFDKAMAEYT
Links
Other
Sox
family TFs
Other
Prunus mume
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCH_Pc24g01780
Penicillium rubens
PCH_Pc24g01780
N
0.000
PCH_Pc24g02380
Penicillium rubens
PCH_Pc24g02380
N
0.000
PDIP_86290
Penicillium digitatum
PDIP_86290
N
0.000
Pc24g00890
Penicillium chrysogenum
Pc24g00890
N
0.000
Pc24g01780
Penicillium chrysogenum
Pc24g01780
N
0.000
Pc24g02380
Penicillium chrysogenum
Pc24g02380
N
0.000