cassava45417.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava45417.m1 T333944_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45417.m1 Sox 44 112
cassava45417.m1 Sox 160 225

Links

Other Sox family TFs
Other Manihot esculenta TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_197789 Agaricus bisporus AGABI2DRAFT_197789 N 0.000
BN946_scf185001.g47 Trametes cinnabarina BN946_scf185001.g47 N 0.000
CC1G_03731 Coprinopsis cinerea CC1G_03731 N 0.000
FOMPIDRAFT_1085863 Fomitopsis pinicola FOMPIDRAFT_1085863 N 0.000
GALMADRAFT_233958 Galerina marginata GALMADRAFT_233958 N 0.000
HETIRDRAFT_181137 Heterobasidion irregulare HETIRDRAFT_181137 N 0.000
HYDPIDRAFT_99864 Hydnomerulius pinastri HYDPIDRAFT_99864 N 0.000
M413DRAFT_237712 Hebeloma cylindrosporum M413DRAFT_237712 N 0.000
Moror_346 Moniliophthora roreri Moror_346 N 0.000
PAXRUDRAFT_33927 Paxillus rubicundulus PAXRUDRAFT_33927 N 0.000
SERLA73DRAFT_66208 Serpula lacrymans SERLA73DRAFT_66208 N 0.000
fgeneshPB_pg.11__148 Phycomyces blakesleeanus fgeneshPB_pg.11__148 N 0.000
gw1.1.1202.1 Heterobasidion annosum gw1.1.1202.1 N 0.000