cassava45417.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava45417.m1 T333944_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45417.m1 Sox 44 112
cassava45417.m1 Sox 160 225

Links

Other Sox family TFs
Other Manihot esculenta TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_016416 Theobroma cacao TCM_016416 I 0.593
orange1.1g017939m.g Citrus sinensis orange1.1g017939m.g N 0.554
GLYMA01G07470 Glycine max GLYMA01G07470 N 0.502
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.418