CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_40569
(
Neurospora discreta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgenesh2_pg.C_40569
T334024_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_40569
Sox
947
1005
QLFFIEEATLIQRQFPSWQSGAINAELWRRWTTMVPSRQESYANRATVAQNQAQTQSHP
estExt_fgenesh2_pg.C_40569
Sox
1034
1088
YYFSTQMGPLRAKHPTYSHQLLLDTILQAWSALPRTHREWFNKQALSQKQQQPQL
estExt_fgenesh2_pg.C_40569
Sox
1309
1368
TPLPVSGYDVFAKELEGRLRKKNPSTSEASLKSVIQRRWEAMSELHRAVYVTMALDEAKS
estExt_fgenesh2_pg.C_40569
Sox
1392
1451
SRKYDGFEYYLNTEGLSVRRKNPEFSYNQVVEATKRQWDALKSTERSNYSNKAFAAAQHP
estExt_fgenesh2_pg.C_40569
Sox
1494
1557
PHDAGFEFWLKFEERKFRDKNPRLTHAEAVTALRKTWDGMTQMARGIFKDMAAKSKANADMTAK
estExt_fgenesh2_pg.C_40569
Sox
1592
1651
DGFTWFLNSEGVDYKKRNPSITYGDLIAVMNARWCGMDGIERSQYEKVAGTLKKSAEGRE
estExt_fgenesh2_pg.C_40569
Sox
1687
1745
DGFTWFLNTAGVNLKKQNPDIGYDEHRTEIYSQWAGLKPTQRREYEHVAFTLKQTAQGR
estExt_fgenesh2_pg.C_40569
Sox
1822
1866
NRRTSYDAVVAKMKARWKSMSVVERLAYEDGAKAVRMSGRRQMTF
estExt_fgenesh2_pg.C_40569
Sox
1929
1984
GFQWFLNTWGHAFKQENRELDYDLVVTITESRWERMTHEERRDFEERAKRMRVDRA
Links
Other
Sox
family TFs
Other
Neurospora discreta
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_125621
Neurospora tetrasperma
NEUTE1DRAFT_125621
N
0.440
NCU00833
Neurospora crassa
NCU00833
N
0.642