CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU00833
(
Neurospora crassa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
NCU00833
T334909_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00833
Sox
1014
1072
QLFFFTERIVIQRQFPSWQSGAINAELWRRWTTMASSRQESYVTRATVAQNQAQTQAHP
NCU00833
Sox
1101
1157
YYFSTQMGSLRAKHPTYSHQLLLDTISKAWSSLPRTHREWFNKQALSQKQQQPQLAP
NCU00833
Sox
1375
1434
TSPPVSGYEAFAKEMEGRLRKRNSSASAASLKSVIQRRWEAMGETHRAVYATMALDKAKS
NCU00833
Sox
1479
1539
PSRKYDGFEYYLNTEGLNVRRKYPGYSYDQVVEATKRQWDALTSTARSNYSNKAFAAAQHP
NCU00833
Sox
1584
1642
HGGFEFWLKFEERKFRDKNPGLTYEETVTALKKTWDGMTQMARRIYEDMAAKAKVNADI
NCU00833
Sox
1680
1740
DGFTWFLNSEGVDYKKQNPNVAYSDLRTAMYARWCGMGSIERSKFEKVAGTLKQSAEGREM
NCU00833
Sox
1775
1833
DGFTWFYNSVGVSLKKQNPDLGYDEHRTEIYSQWSGLKAMQRREYEKVAYTLRQSAQGR
NCU00833
Sox
1900
1940
TSYDSVVAKMKARWKSMSAVERLAYEDGAKAARMSGRRQVT
NCU00833
Sox
2002
2058
GGFNWFLNTWGHAFKQENRELDYELVVTITESRWERMSHEERRDFEDKAKRMRVNVA
Links
Other
Sox
family TFs
Other
Neurospora crassa
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_40569
Neurospora discreta
estExt_fgenesh2_pg.C_40569
N
0.642
NEUTE1DRAFT_125621
Neurospora tetrasperma
NEUTE1DRAFT_125621
N
0.463