fgenesh1_pg.C_scaffold_10000369 (Phanerochaete chrysosporium)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.C_scaffold_10000369 T334096_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_10000369 Sox 80 123
fgenesh1_pg.C_scaffold_10000369 Sox 144 172

Links

Other Sox family TFs
Other Phanerochaete chrysosporium TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.000
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.000
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.000
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.000
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.000
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.000
TCM_035992 Theobroma cacao TCM_035992 N 0.000
Pm022821 Prunus mume Pm022821 N 0.000
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.000
mgf015710m Mimulus guttatus mgf015710m N 0.000
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.000
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.000
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.000
MDP0000168614 Malus domestica MDP0000168614 N 0.000
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.000
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.000