fgenesh2_pg.4_#_1036 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.4_#_1036 T334132_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.4_#_1036 Sox 273 303
fgenesh2_pg.4_#_1036 Sox 321 374

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_00053 Colletotrichum fioriniae CFIO01_00053 N
TRIVIDRAFT_28800 Trichoderma virens TRIVIDRAFT_28800 N
TRIVIDRAFT_40103 Trichoderma virens TRIVIDRAFT_40103 N
VDBG_00716 Verticillium alfalfae VDBG_00716 N