CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G006100
(
Gossypium raimondii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Gorai.013G006100
T334554_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G006100.1
Sox
72
133
QPRSAFNIFWESFMEANKNGNLVDVDRKVFETWKNMSEEERKPYVTQAGKLNSAYMKDMTEA
Gorai.013G006100.2
Sox
72
133
QPRSAFNIFWESFMEANKNGNLVDVDRKVFETWKNMSEEERKPYVTQAGKLNSAYMKDMTEA
Links
Other
Sox
family TFs
Other
Gossypium raimondii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_05211
Cladophialophora psammophila
A1O5_05211
N
ACRE_069230
Acremonium chrysogenum
ACRE_069230
N
BBA_08510
Beauveria bassiana
BBA_08510
N
CSUB01_10231
Colletotrichum sublineola
CSUB01_10231
N
FFUJ_05571
Fusarium fujikuroi
FFUJ_05571
N
FOXG_15657
Fusarium oxysporum
FOXG_15657
N
FVEG_13117
Fusarium verticillioides
FVEG_13117
N
HMPREF1120_04133
Exophiala dermatitidis
HMPREF1120_04133
N
HMPREF1624_01576
Sporothrix schenckii
HMPREF1624_01576
N
OCS_06132
Ophiocordyceps sinensis
OCS_06132
N
OIDMADRAFT_120194
Oidiodendron maius
OIDMADRAFT_120194
N
SBOR_5781
Sclerotinia borealis
SBOR_5781
N
TSTA_094290
Talaromyces stipitatus
TSTA_094290
N
VHEMI08510
Torrubiella hemipterigena
VHEMI08510
N