CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin103376
(
Clonorchis sinensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
csin103376
T336117_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin103376
Sox
1
64
MPYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKNMYVEEYDAEKTQYTEALRQYH
Links
Other
Sox
family TFs
Other
Clonorchis sinensis
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10008515m.g
Citrus clementina
Ciclev10008515m.g
I
0.000
gene08757-v1.0-hybrid
Fragaria vesca
gene08757-v1.0-hybrid
I
0.000
orange1.1g015739m.g
Citrus sinensis
orange1.1g015739m.g
I
0.000
Thhalv10004701m.g
Eutrema salsugineum
Thhalv10004701m.g
I
0.000
BZIP9
Arabidopsis thaliana
AT5G24800
N
0.000
Bo2g159200
Brassica oleracea
Bo2g159200
N
0.000
Bra009793
Brassica rapa
Bra009793
N
0.000
Bra020471
Brassica rapa
Bra020471
N
0.000
ATBZIP9
Arabidopsis lyrata
scaffold_602583.1
N
0.000
Bostr.5763s0039
Boechera stricta
Bostr.5763s0039
N
0.000
Carubv10001471m.g
Capsella rubella
Carubv10001471m.g
N
0.000
evm.TU.supercontig_244.3
Carica papaya
evm.TU.supercontig_244.3
N
0.000