CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDID_0000279401
(
Hymenolepis diminuta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HDID_0000279401
T336416_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HDID_0000279401-mRNA-1
Sox
164
220
EKRFKSAYLAYVEKMMPILKEENPGMRHSQLNDKIYKMFQNAPENPRNQTHSKYNEK
Links
Other
Sox
family TFs
Other
Hymenolepis diminuta
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa015021mg
Prunus persica
PRUPE_ppa015021mg
N
PRUPE_ppa021390mg
Prunus persica
PRUPE_ppa021390mg
N
PRUPE_ppa026741m2g
Prunus persica
PRUPE_ppa026741m2g
N
TCM_007038
Theobroma cacao
TCM_007038
N
Pm021349
Prunus mume
Pm021349
N
Pm021351
Prunus mume
Pm021351
N
cassava5848.m1
Manihot esculenta
cassava5848.m1
N
Ciclev10030084m.g
Citrus clementina
Ciclev10030084m.g
N
evm.TU.supercontig_62.24
Carica papaya
evm.TU.supercontig_62.24
N
Gorai.002G007600
Gossypium raimondii
Gorai.002G007600
N
MDP0000819543
Malus domestica
MDP0000819543
N
orange1.1g036935m.g
Citrus sinensis
orange1.1g036935m.g
N
PK02558.1
Cannabis sativa
PK02558.1
N