CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.002G007600
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.002G007600
T023295_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G007600.1
B3
96
187
MIKYMLPSHVTGGFWLGLPKHFCLNHLPKEDRMMVLEDEEGKEFQVKYLVEKIGLSGGWRGFSIAHKLLEGDVCVFHLVRPSKFKVYIVRKK
Gorai.002G007600.2
B3
89
180
MIKYMLPSHVTGGFWLGLPKHFCLNHLPKEDRMMVLEDEEGKEFQVKYLVEKIGLSGGWRGFSIAHKLLEGDVCVFHLVRPSKFKVYIVRKK
Gorai.002G007600.3
B3
63
154
MIKYMLPSHVTGGFWLGLPKHFCLNHLPKEDRMMVLEDEEGKEFQVKYLVEKIGLSGGWRGFSIAHKLLEGDVCVFHLVRPSKFKVYIVRKK
Gorai.002G007600.4
B3
88
179
MIKYMLPSHVTGGFWLGLPKHFCLNHLPKEDRMMVLEDEEGKEFQVKYLVEKIGLSGGWRGFSIAHKLLEGDVCVFHLVRPSKFKVYIVRKK
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_007038
Theobroma cacao
TCM_007038
N
0.880
PRUPE_ppa015021mg
Prunus persica
PRUPE_ppa015021mg
N
0.761
Pm021349
Prunus mume
Pm021349
N
0.761
MDP0000155544
Malus domestica
MDP0000155544
N
0.750
Ciclev10030084m.g
Citrus clementina
Ciclev10030084m.g
N
0.739
orange1.1g036935m.g
Citrus sinensis
orange1.1g036935m.g
N
0.728
cassava5848.m1
Manihot esculenta
cassava5848.m1
N
0.717
evm.TU.supercontig_62.24
Carica papaya
evm.TU.supercontig_62.24
N
0.717
MDP0000573054
Malus domestica
MDP0000573054
N
0.700