CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001007401
(
Schistosoma margrebowiei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMRZ_0001007401
T336936_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001007401-mRNA-1
Sox
47
95
IGYSQFFQEIQSAIKYEQPNASFHDICQLVDERWNQLSKIEKKLSEDNK
Links
Other
Sox
family TFs
Other
Schistosoma margrebowiei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.416
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.420
Smp_129970
Schistosoma mansoni
Smp_129970
N
0.539
TVAG_453060
Trichomonas vaginalis
TVAG_453060
N
0.437
Sjc_0086690
Schistosoma japonicum
Sjc_0086690
N
0.683
A_06639
Schistosoma haematobium
A_06639
N
0.651
SROB_0001114901
Schistosoma rodhaini
SROB_0001114901
N
0.716
TRE_0000389001
Trichobilharzia regenti
TRE_0000389001
N
0.554