EmuJ_000377200 (Echinococcus multilocularis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 EmuJ_000377200 T341698_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.801 0.764
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.801 0.764
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.801 0.764
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.801 0.764
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.801 0.764
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.801 0.764
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.801 0.764
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.801 0.764
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.801 0.764
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.801 0.764
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.801 0.764
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.801 0.764
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.801 0.764
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.801 0.764
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.801 0.764
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.801 0.764
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.801 0.764
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.778 0.692
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.756 0.643
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EmuJ_000377200 T-box 128 323

Links

Other T-box family TFs
Other Echinococcus multilocularis TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_19047 Cicer arietinum Ca_19047 N
mgf023930m Mimulus guttatus mgf023930m N
mgf013167m Mimulus guttatus mgf013167m N
mgf006916m Mimulus guttatus mgf006916m N
Cucsa.378840 Cucumis sativus Cucsa.378840 N
Cucsa.200310 Cucumis sativus Cucsa.200310 N
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N
cassava28497.m1 Manihot esculenta cassava28497.m1 N
30054.m000824 Ricinus communis 30054.m000824 N
29589.m001281 Ricinus communis 29589.m001281 N
Pm026291 Prunus mume Pm026291 N
Cla001071 Citrullus lanatus Cla001071 N
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N
Ca_00735 Cicer arietinum Ca_00735 N
TRIUR3_34039 Triticum urartu TRIUR3_34039 N
TRIUR3_27842 Triticum urartu TRIUR3_27842 N
TRIUR3_09966 Triticum urartu TRIUR3_09966 N
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N
Lus10027735.g Linum usitatissimum Lus10027735.g N
chr3.CM0396.500.nd Lotus japonicus chr3.CM0396.500.nd N
PK29286.1 Cannabis sativa PK29286.1 N
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
Lus10035554.g Linum usitatissimum Lus10035554.g N
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N
Lus10014396.g Linum usitatissimum Lus10014396.g N
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N
OBART11G11470 Oryza barthii OBART11G11470 N
OBART08G23610 Oryza barthii OBART08G23610 N
OBART01G17820 Oryza barthii OBART01G17820 N
OB08G30470 Oryza brachyantha OB08G30470 N
OB01G27340 Oryza brachyantha OB01G27340 N
MTR_7g102790 Medicago truncatula MTR_7g102790 N
MTR_1g062160 Medicago truncatula MTR_1g062160 N
MLOC_26846 Hordeum vulgare MLOC_26846 N
MLOC_23439 Hordeum vulgare MLOC_23439 N
LPERR08G20370 Leersia perrieri LPERR08G20370 N
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N
GRMZM2G408887 Zea mays GRMZM2G408887 N
GRMZM2G171934 Zea mays GRMZM2G171934 N
GLYMA19G37220 Glycine max GLYMA19G37220 N
GLYMA13G21140 Glycine max GLYMA13G21140 N
GLYMA10G07240 Glycine max GLYMA10G07240 N
GLYMA03G34530 Glycine max GLYMA03G34530 N
F775_30314 Aegilops tauschii F775_30314 N
F775_22386 Aegilops tauschii F775_22386 N
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N
BGIOSGA035191 Oryza indica BGIOSGA035191 N
OS08G0560300 Oryza sativa OS08G0560300 N
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N
TCM_041560 Theobroma cacao TCM_041560 N
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N
Sb08g005380 Sorghum bicolor Sb08g005380 N
Sb07g024020 Sorghum bicolor Sb07g024020 N
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N
BGIOSGA001528 Oryza indica BGIOSGA001528 N
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N
ORGLA11G0098700 Oryza glaberrima ORGLA11G0098700 N
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N
OPUNC08G21610 Oryza punctata OPUNC08G21610 N
OPUNC01G18340 Oryza punctata OPUNC01G18340 N
ONIVA08G26670 Oryza nivara ONIVA08G26670 N
OMERI08G18450 Oryza meridionalis OMERI08G18450 N
OLONG_020563 Oryza longistaminata OLONG_020563 N
OGLUM11G11350 Oryza glumaepatula OGLUM11G11350 N
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N