CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA12630
(
Caenorhabditis japonica
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CJA12630
T342208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA12630a
TBP
301
382
DIQIRNVVCNYTLPLHIDLRKLAMNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA12630a
TBP
394
477
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEEDVLEVISKIYDVVVEF
CJA12630b
TBP
304
385
DIQIRNVVCNYTLPLHIDLRKLAMNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA12630b
TBP
397
480
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEEDVLEVISKIYDVVVEF
Links
Other
TBP
family TFs
Other
Caenorhabditis japonica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG78523
Fusarium solani
NechaG78523
N
VDBG_06470
Verticillium alfalfae
VDBG_06470
N
fgenesh1_pg.sca_60_chr3_6_0000027
Nectria haematococca
fgenesh1_pg.sca_60_chr3_6_0000027
N