CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CJA12630
(
Caenorhabditis japonica
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CJA12630
T342208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA12630a
TBP
301
382
DIQIRNVVCNYTLPLHIDLRKLAMNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA12630a
TBP
394
477
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEEDVLEVISKIYDVVVEF
CJA12630b
TBP
304
385
DIQIRNVVCNYTLPLHIDLRKLAMNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA12630b
TBP
397
480
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEEDVLEVISKIYDVVVEF
Links
Other
TBP
family TFs
Other
Caenorhabditis japonica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA31001
Caenorhabditis japonica
CJA31001
N
0.937
CBG12345
Caenorhabditis briggsae
CBG12345
N
0.921
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.915
CRE29744
Caenorhabditis remanei
CRE29744
N
0.909
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
0.745
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.739
HCOI00597600
Haemonchus contortus
HCOI00597600
N
0.733
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
0.721
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
0.709
ASU_03242
Ascaris suum
ASU_03242
N
0.709
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
0.709