CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ALUE_0000981201
(
Ascaris lumbricoides
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
ALUE_0000981201
T343398_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000981201-mRNA-1
TBP
265
346
DIQIRNVVCTYTLPLHIDLHRVALNCGNVTFDRGRGVLLKQKRNPLCYVKVYSSGKIYIVGCRSEAECKRAARGVARMVQKS
ALUE_0000981201-mRNA-1
TBP
358
441
NYRICNVLATCKMPFGIKIEEMAQKYPENSDYEPELSVGLVWRSVDPKATLRIHTTGSITVTGALSEADVMKAIEVIYPILREF
Links
Other
TBP
family TFs
Other
Ascaris lumbricoides
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_03242
Ascaris suum
ASU_03242
N
1.000
OFLC_0000425901
Onchocerca flexuosa
OFLC_0000425901
N
0.902
nDi.2.2.2.g05314
Dirofilaria immitis
nDi.2.2.2.g05314
N
0.873
TCLT_0000474901
Thelazia callipaeda
TCLT_0000474901
N
0.873
Bm3947
Brugia malayi
Bm3947
N
0.867
LOAG_02128
Loa loa
LOAG_02128
N
0.867
nLs.2.1.2.g03126
Litomosoides sigmodontis
nLs.2.1.2.g03126
N
0.867
WUBG_01280
Wuchereria bancrofti
WUBG_01280
N
0.866
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
0.861
WBGene00238395
Onchocerca volvulus
WBGene00238395
N
0.852
TCNE_0000853601
Toxocara canis
TCNE_0000853601
N
0.842
DME_0000578001
Dracunculus medinensis
DME_0000578001
N
0.824
EVEC_0000523501
Enterobius vermicularis
EVEC_0000523501
N
0.824
ASIM_0001432701
Anisakis simplex
ASIM_0001432701
N
0.817
BTMF_0000795401
Brugia timori
BTMF_0000795401
N
0.813
ASIM_0001210001
Anisakis simplex
ASIM_0001210001
N
0.812
ANCCAN_08298
Ancylostoma caninum
ANCCAN_08298
N
0.796
ASU_13374
Ascaris suum
ASU_13374
N
0.795
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.794
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
0.794
HCOI00597600
Haemonchus contortus
HCOI00597600
N
0.788
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
0.776
HPLM_0001056701
Haemonchus placei
HPLM_0001056701
N
0.769
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
0.765
Ppa-tlf-1
Pristionchus pacificus
PPA12059
N
0.764
scaffold259-EXSNAP2012.8
Pristionchus exspectatus
scaffold259-EXSNAP2012.8
N
0.764
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.745
ANCCEY_06495
Ancylostoma ceylanicum
ANCCEY_06495
N
0.739
ANCDUO_13479
Ancylostoma duodenale
ANCDUO_13479
N
0.739
Hba_19518
Heterorhabditis bacteriophora
Hba_19518
N
0.734
SMUV_0000869101
Syphacia muris
SMUV_0000869101
N
0.734
CBG12345
Caenorhabditis briggsae
CBG12345
N
0.727
nOo.2.0.1.g03279
Onchocerca ochengi
nOo.2.0.1.g03279
N
0.722
CJA31001
Caenorhabditis japonica
CJA31001
N
0.719
L596_g17870
Steinernema carpocapsae
L596_g17870
N
0.717
CRE29744
Caenorhabditis remanei
CRE29744
N
0.715
CJA12630
Caenorhabditis japonica
CJA12630
N
0.709
L898_g22922
Steinernema monticolum
L898_g22922
N
0.709
BXY_0681600
Bursaphelenchus xylophilus
BXY_0681600
N
0.703
L892_g21047
Steinernema scapterisci
L892_g21047
N
0.703