CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001056701
(
Haemonchus placei
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
HPLM_0001056701
T343501_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001056701-mRNA-1
TBP
1
47
QVLLKQKRKPNCYVKIYSSGKVYIVGCKSEADCMTAARTIARRVQKT
HPLM_0001056701-mRNA-1
TBP
59
142
NYKVCNVLATCRMPFGIKIEELAQQYPAQSQYEPELSVGLVWRSQDPKATLRIHTTGSITVTGASSESDVMRSIEMMYPIVRKF
Links
Other
TBP
family TFs
Other
Haemonchus placei
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.962
HCOI00597600
Haemonchus contortus
HCOI00597600
N
0.782
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
0.770
Bm3947
Brugia malayi
Bm3947
N
0.769
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
0.769
ASU_03242
Ascaris suum
ASU_03242
N
0.769
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
0.762
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
0.758
DME_0000578001
Dracunculus medinensis
DME_0000578001
N
0.754
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.723
WBGene00238395
Onchocerca volvulus
WBGene00238395
N
0.723
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
0.723
ANCCAN_08298
Ancylostoma caninum
ANCCAN_08298
N
0.721