CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA31001
(
Caenorhabditis japonica
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CJA31001
T342210_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA31001a
TBP
1
59
MNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA31001a
TBP
71
133
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTG
CJA31001b
TBP
1
59
MNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA31001b
TBP
71
138
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGGIHIF
Links
Other
TBP
family TFs
Other
Caenorhabditis japonica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA12630
Caenorhabditis japonica
CJA12630
N
0.937
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.909
CBG12345
Caenorhabditis briggsae
CBG12345
N
0.881
CRE29744
Caenorhabditis remanei
CRE29744
N
0.857
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.719
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
0.719
ASU_03242
Ascaris suum
ASU_03242
N
0.719