Solyc02g077250.2 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc02g077250.2 T344401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.921 0.500
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.918 0.491
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.916 0.500
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.916 0.500
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.916 0.500
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.913 0.518
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.880 0.412
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.869 0.395
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.869 0.395
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.865 0.404
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.865 0.404
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.856 0.386
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.856 0.386
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.843 0.386
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.830 0.360
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g077250.2.1 TCP 116 277

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

403 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.000
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.000
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.000
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.000
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.000
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.000
SPL14 Oryza sativa OS08G0509600 I 0.000
OS09G0491532 Oryza sativa OS09G0491532 I 0.000
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.000
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.000
Si030195m.g Setaria italica Si030195m.g I 0.000
TCM_024873 Theobroma cacao TCM_024873 I 0.000
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.000
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.000
29269.m000250 Ricinus communis 29269.m000250 I 0.000
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.000
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.000
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.000
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.000
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.000
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.000
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.000
PK18312.1 Cannabis sativa PK18312.1 I 0.000
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.000
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.000
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.000
F775_10743 Aegilops tauschii F775_10743 I 0.000
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.000
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.000
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.000
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.000
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.000
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.000
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.000
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.000
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.000
OB08G26920 Oryza brachyantha OB08G26920 I 0.000
OBART09G14800 Oryza barthii OBART09G14800 I 0.000
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.000
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.000
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.000
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.000
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.000
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.000
OBART08G20010 Oryza barthii OBART08G20010 N 0.000
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.000