OGLUM09G15430 (Oryza glumaepatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OGLUM09G15430 T322802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.931 0.747
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.920 0.653
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.905 0.680
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.905 0.680
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.905 0.680
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.888 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G15430.1 SBP 75 156

Links

Other SBP family TFs
Other Oryza glumaepatula TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART09G14800 Oryza barthii OBART09G14800 I 0.987
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.987
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.987
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.987
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.987
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.987
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.984
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.984
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.983
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.982
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.980
F775_10743 Aegilops tauschii F775_10743 I 0.978
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.978
Si030195m.g Setaria italica Si030195m.g I 0.976
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.976
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.976
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.974
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.974
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.974
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.974
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.974
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.974
SPL14 Oryza sativa OS08G0509600 I 0.974
OB09G21350 Oryza brachyantha OB09G21350 N 0.973
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.972
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.972
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.972
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.972
OS09G0491532 Oryza sativa OS09G0491532 I 0.972
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.971
OB08G26920 Oryza brachyantha OB08G26920 I 0.971
Si013870m.g Setaria italica Si013870m.g I 0.969
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.969
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.968
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.968
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.968
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.968
PK18312.1 Cannabis sativa PK18312.1 I 0.968
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.967
TCM_024873 Theobroma cacao TCM_024873 I 0.967
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.967
29269.m000250 Ricinus communis 29269.m000250 I 0.967
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.967
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.967
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.965
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.964
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.963
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.963
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.962
Ca_07299 Cicer arietinum Ca_07299 I 0.962
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.962
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.962
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.959
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.957
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.956
mgf012995m Mimulus guttatus mgf012995m I 0.956
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.954
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.954
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.954
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.953
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.953
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.953
Pm002693 Prunus mume Pm002693 I 0.953
MDP0000297978 Malus domestica MDP0000297978 I 0.953
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.944
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.944
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.944
mgf001295m Mimulus guttatus mgf001295m I 0.943
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.943
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.942
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.942
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.941
Pm007035 Prunus mume Pm007035 I 0.939
PK11310.1 Cannabis sativa PK11310.1 I 0.937
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.931
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.931
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.930
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.929
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.929
Si034095m.g Setaria italica Si034095m.g I 0.929
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.929
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.929
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.927
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.927
mgf025134m Mimulus guttatus mgf025134m I 0.927
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.926
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.926
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.925
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.925
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.925
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.925
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.925
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.925
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.923
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.922
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.922
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.922
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.922
OB03G47050 Oryza brachyantha OB03G47050 I 0.921
OBART03G39900 Oryza barthii OBART03G39900 I 0.921
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.921
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.921
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.921
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.921
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.921
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.921
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.921
SPL6 Oryza sativa OS03G0833300 I 0.921
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.920
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.920
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.920
Ca_03548 Cicer arietinum Ca_03548 I 0.920
30076.m004574 Ricinus communis 30076.m004574 I 0.920
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.920
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.920
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.920
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.920
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.920
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.920
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.920
PK06791.1 Cannabis sativa PK06791.1 D 0.920
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.919
F775_31139 Aegilops tauschii F775_31139 I 0.919
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.919
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.919
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.919
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.919
TCM_004922 Theobroma cacao TCM_004922 I 0.919
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.919
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.919
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.919
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.918
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.918
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.918
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.917
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.917
mgf009459m Mimulus guttatus mgf009459m I 0.917
MDP0000919693 Malus domestica MDP0000919693 I 0.917
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.917
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.916
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.916
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.915
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.914
TCM_031595 Theobroma cacao TCM_031595 I 0.914
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.914
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.914
28211.m000132 Ricinus communis 28211.m000132 I 0.913
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.912
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.912
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.912
Bo4g005730 Brassica oleracea Bo4g005730 I 0.911
Bra041037 Brassica rapa Bra041037 I 0.911
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.911
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.911
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.911
Pm017778 Prunus mume Pm017778 I 0.911
29889.m003388 Ricinus communis 29889.m003388 I 0.911
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.911
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.911
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.911
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.910
OB08G27190 Oryza brachyantha OB08G27190 I 0.910
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.910
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.910
MDP0000919694 Malus domestica MDP0000919694 I 0.910
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.909
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.909
TCM_021482 Theobroma cacao TCM_021482 I 0.909
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.909
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.909
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.909
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.909
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.909
MDP0000180408 Malus domestica MDP0000180408 I 0.909
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.908
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.906
MDP0000156994 Malus domestica MDP0000156994 I 0.906
MDP0000861601 Malus domestica MDP0000861601 I 0.906
SPL1 Arabidopsis thaliana AT2G47070 D 0.905
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.905
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.904
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.903
TCM_005620 Theobroma cacao TCM_005620 I 0.903
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.903
Ca_10879 Cicer arietinum Ca_10879 I 0.903
MDP0000262141 Malus domestica MDP0000262141 I 0.903
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.902
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.901
Bo4g191350 Brassica oleracea Bo4g191350 I 0.901
Bra016891 Brassica rapa Bra016891 I 0.901
OBART07G15570 Oryza barthii OBART07G15570 I 0.901
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.901
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.901
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.901
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.901
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.899
30174.m008805 Ricinus communis 30174.m008805 I 0.899
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I 0.899
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.899
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.899
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.898
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.898
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.898
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.898
Bo4g015800 Brassica oleracea Bo4g015800 I 0.896
Bra004674 Brassica rapa Bra004674 I 0.896
Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I 0.896
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.895
Ca_24655 Cicer arietinum Ca_24655 I 0.895
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.894
MDP0000180409 Malus domestica MDP0000180409 I 0.894
OB04G27960 Oryza brachyantha OB04G27960 I 0.892
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.891
MDP0000589558 Malus domestica MDP0000589558 I 0.891
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.891
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.890
OBART04G20940 Oryza barthii OBART04G20940 I 0.890
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.890
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.890
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.890
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.890
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.890
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.890
SPL7 Oryza sativa OS04G0551500 I 0.890
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.890
Pm008474 Prunus mume Pm008474 I 0.890
Pm008475 Prunus mume Pm008475 I 0.890
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.890
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.890
Cla021411 Citrullus lanatus Cla021411 I 0.889
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.889
SPL12 Arabidopsis thaliana AT3G60030 D 0.888
mgf001202m Mimulus guttatus mgf001202m I 0.888
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.887
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.887
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.887
Ca_16243 Cicer arietinum Ca_16243 I 0.887
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.887
OBART08G20010 Oryza barthii OBART08G20010 N 0.886
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.886
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.886