Gorai.007G362000 (Gossypium raimondii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Gorai.007G362000 T323511_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.896 0.787
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G362000.1 SBP 76 150

Links

Other SBP family TFs
Other Gossypium raimondii TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.958
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.945
OB09G21350 Oryza brachyantha OB09G21350 N 0.935
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.931
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.931
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.931
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.929
TCM_024873 Theobroma cacao TCM_024873 I 0.928
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.928
29269.m000250 Ricinus communis 29269.m000250 I 0.928
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.928
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.928
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.927
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.927
Si013151m.g Setaria italica Si013151m.g I 0.926
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.926
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.925
PK18312.1 Cannabis sativa PK18312.1 I 0.925
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.924
Cla017596 Citrullus lanatus Cla017596 I 0.923
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.923
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.922
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.919
mgf001295m Mimulus guttatus mgf001295m I 0.917
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.916
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.916
Pm002693 Prunus mume Pm002693 I 0.916
MDP0000297978 Malus domestica MDP0000297978 I 0.916
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.915
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.914
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.913
mgf012995m Mimulus guttatus mgf012995m I 0.913
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.912
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.912
gw1.47.180.1 Physcomitrella patens gw1.47.180.1 I 0.911
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.911
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.911
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.911
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.910
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I 0.909
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.907
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.907
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.905
Ca_07299 Cicer arietinum Ca_07299 I 0.905
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.905
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.905
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.905
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.905
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.905
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.904
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.902
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.901
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.901
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.901
OBART07G15570 Oryza barthii OBART07G15570 I 0.901
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.901
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.901
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.901
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.901
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.901
Si032170m.g Setaria italica Si032170m.g I 0.901
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.900
MDP0000149339 Malus domestica MDP0000149339 I 0.900
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.900
OBART09G14800 Oryza barthii OBART09G14800 I 0.899
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.899
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.899
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.899
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.899
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.899
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.899
cassava7404.valid.m1 Manihot esculenta cassava7404.valid.m1 I 0.899
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.899
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.896
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.896
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.896
F775_10743 Aegilops tauschii F775_10743 I 0.894
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.893
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.893
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.893
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.893
Si030195m.g Setaria italica Si030195m.g I 0.892
mgf001202m Mimulus guttatus mgf001202m I 0.892
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.892
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.892
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.891
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.891
30170.m014245 Ricinus communis 30170.m014245 I 0.891
Ciclev10000100m.g Citrus clementina Ciclev10000100m.g I 0.891
orange1.1g001317m.g Citrus sinensis orange1.1g001317m.g I 0.891
PK25661.1 Cannabis sativa PK25661.1 I 0.891
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.890
OB08G26920 Oryza brachyantha OB08G26920 I 0.890
Si013870m.g Setaria italica Si013870m.g I 0.890
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.889
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.889
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.888
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.888
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.887
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.887
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.887
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.887
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.887
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.887
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.887
SPL14 Oryza sativa OS08G0509600 I 0.887
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.886
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I 0.886