TCM_031706 (Theobroma cacao)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 TCM_031706 T344449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.955 0.517
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.955 0.517
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.955 0.517
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.954 0.533
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.954 0.533
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.938 0.517
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.894 0.442
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.408
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.886 0.408
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.869 0.383
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.850 0.417
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.847 0.375
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.841 0.400
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.841 0.400
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY13178 TCP 186 332

Links

Other TCP family TFs
Other Theobroma cacao TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC010 Arabidopsis thaliana AT1G28470 D
NAC073 Arabidopsis thaliana AT4G28500 D
anac075 Arabidopsis thaliana AT4G29230 D
PK27085.1 Cannabis sativa PK27085.1 D
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I
SOG1 Arabidopsis thaliana AT1G25580 I
anac085 Arabidopsis thaliana AT5G14490 I
BGIOSGA002220 Oryza indica BGIOSGA002220 I
Bo1g016630 Brassica oleracea Bo1g016630 I
Bo1g017410 Brassica oleracea Bo1g017410 I
Bo5g055990 Brassica oleracea Bo5g055990 I
Bo7g047040 Brassica oleracea Bo7g047040 I
Bo7g113660 Brassica oleracea Bo7g113660 I
Bra006257 Brassica rapa Bra006257 I
Bra011034 Brassica rapa Bra011034 I
Bra011090 Brassica rapa Bra011090 I
Bra024152 Brassica rapa Bra024152 I
Bra024197 Brassica rapa Bra024197 I
Bra030099 Brassica rapa Bra030099 I
Bra032910 Brassica rapa Bra032910 I
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I
GLYMA01G00880 Glycine max GLYMA01G00880 I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA05G36031 Glycine max GLYMA05G36031 I
GLYMA06G44250 Glycine max GLYMA06G44250 I
GLYMA07G32250 Glycine max GLYMA07G32250 I
GLYMA08G03590 Glycine max GLYMA08G03590 I
GLYMA12G13710 Glycine max GLYMA12G13710 I
GLYMA12G33460 Glycine max GLYMA12G33460 I
GLYMA13G24320 Glycine max GLYMA13G24320 I
GLYMA13G36980 Glycine max GLYMA13G36980 I
GLYMA20G32690 Glycine max GLYMA20G32690 I
GRMZM2G027309 Zea mays GRMZM2G027309 I
GRMZM2G078954 Zea mays GRMZM2G078954 I
GRMZM2G086768 Zea mays GRMZM2G086768 I
GRMZM2G112681 Zea mays GRMZM2G112681 I
GRMZM2G166721 Zea mays GRMZM2G166721 I
GRMZM2G379608 Zea mays GRMZM2G379608 I
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I
LPERR01G05530 Leersia perrieri LPERR01G05530 I
MLOC_75795 Hordeum vulgare MLOC_75795 I
MTR_1g093670 Medicago truncatula MTR_1g093670 I
MTR_1g093680 Medicago truncatula MTR_1g093680 I
MTR_2g090735 Medicago truncatula MTR_2g090735 I
MTR_4g078875 Medicago truncatula MTR_4g078875 I
MTR_4g088245 Medicago truncatula MTR_4g088245 I
MTR_5g053430 Medicago truncatula MTR_5g053430 I
MTR_8g069160 Medicago truncatula MTR_8g069160 I
OB01G15780 Oryza brachyantha OB01G15780 I
OBART01G05840 Oryza barthii OBART01G05840 I
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I
OLONG_008708 Oryza longistaminata OLONG_008708 I
ONIVA01G06690 Oryza nivara ONIVA01G06690 I
OPUNC01G05680 Oryza punctata OPUNC01G05680 I
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I
OS01G0191300 Oryza sativa OS01G0191300 I
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I
Sb03g003170 Sorghum bicolor Sb03g003170 I
Sb03g030750 Sorghum bicolor Sb03g030750 I
Sb10g009670 Sorghum bicolor Sb10g009670 I
SOG1 Arabidopsis lyrata scaffold_102939.1 I
ANAC010 Arabidopsis lyrata scaffold_103183.1 I
Si001527m.g Setaria italica Si001527m.g I
Si002301m.g Setaria italica Si002301m.g I
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
TCM_029798 Theobroma cacao TCM_029798 I
TCM_037747 Theobroma cacao TCM_037747 I
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I
TRIUR3_27393 Triticum urartu TRIUR3_27393 I
SOG1 Vitis vinifera VIT_01s0011g02990 I
ANAC010 Vitis vinifera VIT_10s0003g00350 I
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I
Ca_02457 Cicer arietinum Ca_02457 I
Ca_06348 Cicer arietinum Ca_06348 I
Ca_11273 Cicer arietinum Ca_11273 I
Cla004701 Citrullus lanatus Cla004701 I
Cla009808 Citrullus lanatus Cla009808 I
Cla011431 Citrullus lanatus Cla011431 I
Cla020673 Citrullus lanatus Cla020673 I
Pm010104 Prunus mume Pm010104 I
Pm015625 Prunus mume Pm015625 I
Pm027280 Prunus mume Pm027280 I
Pm029010 Prunus mume Pm029010 I
29738.m001046 Ricinus communis 29738.m001046 I
29912.m005354 Ricinus communis 29912.m005354 I
30190.m010767 Ricinus communis 30190.m010767 I
cassava11584.m1 Manihot esculenta cassava11584.m1 I
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I
cassava16121.m1 Manihot esculenta cassava16121.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
cassava44586.m1 Manihot esculenta cassava44586.m1 I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.126960 Cucumis sativus Cucsa.126960 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Cucsa.288680 Cucumis sativus Cucsa.288680 I
mgf012882m Mimulus guttatus mgf012882m I
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I
Carubv10002665m.g Capsella rubella Carubv10002665m.g I
Carubv10004602m.g Capsella rubella Carubv10004602m.g I
Carubv10005324m.g Capsella rubella Carubv10005324m.g I
Carubv10009087m.g Capsella rubella Carubv10009087m.g I
Carubv10009638m.g Capsella rubella Carubv10009638m.g I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I
Eucgr.D00595 Eucalyptus grandis Eucgr.D00595 I
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I
Lus10013967.g Linum usitatissimum Lus10013967.g I
Lus10015392.g Linum usitatissimum Lus10015392.g I
Lus10021708.g Linum usitatissimum Lus10021708.g I
MDP0000124509 Malus domestica MDP0000124509 I
MDP0000276278 Malus domestica MDP0000276278 I
MDP0000309351 Malus domestica MDP0000309351 I
MDP0000663564 Malus domestica MDP0000663564 I
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I
Pavir.J05241 Panicum virgatum Pavir.J05241 I
Pavir.J13205 Panicum virgatum Pavir.J13205 I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N
anac044 Arabidopsis thaliana AT3G01600 N
Bra001000 Brassica rapa Bra001000 N
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N
Carubv10014004m.g Capsella rubella Carubv10014004m.g N
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N