mgf025386m (Mimulus guttatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 mgf025386m T344680_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.925 0.477
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.925 0.477
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.925 0.477
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.923 0.477
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf025386m TCP 122 186
mgf025386m TCP 182 204

Links

Other TCP family TFs
Other Mimulus guttatus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP24 Arabidopsis thaliana AT1G30210 D 0.925
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.923
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.870
Cla020670 Citrullus lanatus Cla020670 I 0.946
mgf014960m Mimulus guttatus mgf014960m I 0.853
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.925
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.959
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.960
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I 0.955
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.954
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.948
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.914
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.926
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.960
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.911
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.961
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.905
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.958
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.953
OS07G0152000 Oryza sativa OS07G0152000 I 0.914
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I 0.934
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I 0.931
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.914
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.914
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.914
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.923
OBART07G03380 Oryza barthii OBART07G03380 I 0.930
Bra032365 Brassica rapa Bra032365 I 0.929
Bo6g107240 Brassica oleracea Bo6g107240 I 0.954
Bo5g062580 Brassica oleracea Bo5g062580 I 0.928
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.914