gene29800-v1.0-hybrid (Fragaria vesca)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 gene29800-v1.0-hybrid T344845_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna29800.1-v1.0-hybrid TCP 71 201

Links

Other TCP family TFs
Other Fragaria vesca TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00041830 Amborella trichopoda AMTR_s00007p00041830 I 0.852
AMTR_s00021p00158020 Amborella trichopoda AMTR_s00021p00158020 I 0.843
AMTR_s00119p00135380 Amborella trichopoda AMTR_s00119p00135380 I 0.841
TCP10 Arabidopsis thaliana AT2G31070 I 0.836
Bo1g129830 Brassica oleracea Bo1g129830 I 0.827
Bo4g053680 Brassica oleracea Bo4g053680 I 0.853
Bo5g127500 Brassica oleracea Bo5g127500 I 0.826
Bra018280 Brassica rapa Bra018280 I 0.853
Bra027284 Brassica rapa Bra027284 I 0.824
Bra030952 Brassica rapa Bra030952 I 0.826
BRADI2G50190 Brachypodium distachyon BRADI2G50190 I 0.829
F775_07590 Aegilops tauschii F775_07590 I 0.825
GLYMA06G34330 Glycine max GLYMA06G34330 I 0.852
GLYMA06G43721 Glycine max GLYMA06G43721 I 0.859
GLYMA12G14200 Glycine max GLYMA12G14200 I 0.848
GLYMA12G20160 Glycine max GLYMA12G20160 I 0.851
GLYMA12G33640 Glycine max GLYMA12G33640 I 0.862
GLYMA12G35720 Glycine max GLYMA12G35720 I 0.844
GLYMA13G34690 Glycine max GLYMA13G34690 I 0.826
GLYMA13G36840 Glycine max GLYMA13G36840 I 0.830
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.831
GSMUA_Achr3G03540_001 Musa acuminata GSMUA_Achr3G03540_001 I 0.828
GSMUA_Achr3G31370_001 Musa acuminata GSMUA_Achr3G31370_001 I 0.832
GSMUA_Achr5G06660_001 Musa acuminata GSMUA_Achr5G06660_001 I 0.823
GSMUA_Achr7G25320_001 Musa acuminata GSMUA_Achr7G25320_001 I 0.831
GSMUA_Achr8G19990_001 Musa acuminata GSMUA_Achr8G19990_001 I 0.849
MLOC_12004 Hordeum vulgare MLOC_12004 I 0.822
MTR_2g078200 Medicago truncatula MTR_2g078200 I 0.834
MTR_2g090960 Medicago truncatula MTR_2g090960 I 0.839
MTR_4g079580 Medicago truncatula MTR_4g079580 I 0.860
PGSC0003DMG400009406 Solanum tuberosum PGSC0003DMG400009406 I 0.857
PGSC0003DMG400012396 Solanum tuberosum PGSC0003DMG400012396 I 0.822
PGSC0003DMG400015377 Solanum tuberosum PGSC0003DMG400015377 I 0.854
PGSC0003DMG400022964 Solanum tuberosum PGSC0003DMG400022964 I 0.824
XM_002300382.1 Populus trichocarpa POPTR_0001s38480 I 0.835
POPTR_0011s09890 Populus trichocarpa POPTR_0011s09890 I 0.823
POPTR_0013s12370 Populus trichocarpa POPTR_0013s12370 I 0.837
POPTR_0019s12110 Populus trichocarpa POPTR_0019s12110 I 0.828
PRUPE_ppa004661mg Prunus persica PRUPE_ppa004661mg I 0.846
PRUPE_ppa007094mg Prunus persica PRUPE_ppa007094mg I 0.822
PRUPE_ppb024383mg Prunus persica PRUPE_ppb024383mg I 0.872
TCP10 Arabidopsis lyrata scaffold_401627.1 I 0.836
Solyc02g077250.2 Solanum lycopersicum Solyc02g077250.2 I 0.847
Solyc05g012840.1 Solanum lycopersicum Solyc05g012840.1 I 0.848
Solyc07g053410.2 Solanum lycopersicum Solyc07g053410.2 I 0.853
Solyc07g062680.1 Solanum lycopersicum Solyc07g062680.1 I 0.826
Solyc10g018710.1 Solanum lycopersicum Solyc10g018710.1 I 0.824
Solyc11g045640.1 Solanum lycopersicum Solyc11g045640.1 I 0.823
Solyc12g014140.1 Solanum lycopersicum Solyc12g014140.1 I 0.853
TCM_003652 Theobroma cacao TCM_003652 I 0.835
TCM_031706 Theobroma cacao TCM_031706 I 0.822
VIT_10s0003g00870 Vitis vinifera VIT_10s0003g00870 I 0.847
TCP10 Vitis vinifera VIT_12s0028g02520 I 0.829
VIT_19s0014g01680 Vitis vinifera VIT_19s0014g01680 I 0.835
Ca_02473 Cicer arietinum Ca_02473 I 0.832
Ca_11295 Cicer arietinum Ca_11295 I 0.853
Ca_12866 Cicer arietinum Ca_12866 I 0.826
Ca_16227 Cicer arietinum Ca_16227 I 0.835
Cla002460 Citrullus lanatus Cla002460 I 0.845
Cla016530 Citrullus lanatus Cla016530 I 0.826
Cla023702 Citrullus lanatus Cla023702 I 0.851
Pm010118 Prunus mume Pm010118 I 0.872
Pm011369 Prunus mume Pm011369 I 0.846
Pm029788 Prunus mume Pm029788 I 0.825
29646.m001100 Ricinus communis 29646.m001100 I 0.824
29646.m001101 Ricinus communis 29646.m001101 I 0.826
30192.m000545 Ricinus communis 30192.m000545 I 0.845
cassava19177.valid.m1 Manihot esculenta cassava19177.valid.m1 I 0.829
cassava35669.valid.m1 Manihot esculenta cassava35669.valid.m1 I 0.834
cassava35945.valid.m1 Manihot esculenta cassava35945.valid.m1 I 0.838
Cucsa.122730 Cucumis sativus Cucsa.122730 I 0.851
Cucsa.273460 Cucumis sativus Cucsa.273460 I 0.845
mgf002386m Mimulus guttatus mgf002386m I 0.841
Aquca_005_00099 Aquilegia coerulea Aquca_005_00099 I 0.836
Bostr.0124s0115 Boechera stricta Bostr.0124s0115 I 0.822
Bostr.24513s0122 Boechera stricta Bostr.24513s0122 I 0.836
Bostr.28625s0206 Boechera stricta Bostr.28625s0206 I 0.830
Cagra.0007s0045 Capsella grandiflora Cagra.0007s0045 I 0.827
Cagra.1472s0007 Capsella grandiflora Cagra.1472s0007 I 0.835
Cagra.2527s0006 Capsella grandiflora Cagra.2527s0006 I 0.835
Carubv10009348m.g Capsella rubella Carubv10009348m.g I 0.835
Carubv10023502m.g Capsella rubella Carubv10023502m.g I 0.835
Ciclev10008390m.g Citrus clementina Ciclev10008390m.g I 0.851
Ciclev10015871m.g Citrus clementina Ciclev10015871m.g I 0.842
Eucgr.K01089 Eucalyptus grandis Eucgr.K01089 I 0.834
evm.TU.supercontig_131.71 Carica papaya evm.TU.supercontig_131.71 I 0.837
evm.TU.supercontig_209.13 Carica papaya evm.TU.supercontig_209.13 I 0.830
gene17805-v1.0-hybrid Fragaria vesca gene17805-v1.0-hybrid I 0.833
gene27171-v1.0-hybrid Fragaria vesca gene27171-v1.0-hybrid I 0.856
Gorai.002G064500 Gossypium raimondii Gorai.002G064500 I 0.827
Gorai.009G373000 Gossypium raimondii Gorai.009G373000 I 0.828
Gorai.013G172800 Gossypium raimondii Gorai.013G172800 I 0.829
Lus10000463.g Linum usitatissimum Lus10000463.g I 0.827
MDP0000182310 Malus domestica MDP0000182310 I 0.858
MDP0000184743 Malus domestica MDP0000184743 I 0.846
MDP0000189749 Malus domestica MDP0000189749 I 0.839
MDP0000243495 Malus domestica MDP0000243495 I 0.851
MDP0000259723 Malus domestica MDP0000259723 I 0.858
MDP0000442611 Malus domestica MDP0000442611 I 0.826
orange1.1g014360m.g Citrus sinensis orange1.1g014360m.g I 0.851
orange1.1g019898m.g Citrus sinensis orange1.1g019898m.g I 0.842
SapurV1A.0083s0520 Salix purpurea SapurV1A.0083s0520 I 0.834
SapurV1A.0303s0040 Salix purpurea SapurV1A.0303s0040 I 0.833
SapurV1A.1073s0050 Salix purpurea SapurV1A.1073s0050 I 0.834
SapurV1A.2882s0020 Salix purpurea SapurV1A.2882s0020 I 0.834
SapurV1A.5793s0010 Salix purpurea SapurV1A.5793s0010 I 0.834
Thhalv10011534m.g Eutrema salsugineum Thhalv10011534m.g I 0.822
Thhalv10016870m.g Eutrema salsugineum Thhalv10016870m.g I 0.832
PK04257.1 Cannabis sativa PK04257.1 I 0.842
PK12847.1 Cannabis sativa PK12847.1 I 0.828