PDK_20s1781021g001 (Phoenix dactylifera)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PDK_20s1781021g001 T345140_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.946 0.392
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.945 0.405
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.944 0.392
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.913 0.342
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.913 0.342
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.892 0.342
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.892 0.342
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.882 0.329
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.877 0.354
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.853 0.297
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.853 0.297
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.845 0.285
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.845 0.285
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.845 0.285
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.842 0.316
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.838 0.310
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1781021g001 TCP 44 213

Links

Other TCP family TFs
Other Phoenix dactylifera TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004641 Ricinus communis 29929.m004641 I 0.000
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.000
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.000
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.000
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.000
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.000
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.000
mgf019346m Mimulus guttatus mgf019346m I 0.000
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.000
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.000
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.000
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.000
ORUFI06G25590 Oryza rufipogon ORUFI06G25590 N 0.000
ORGLA06G0199900 Oryza glaberrima ORGLA06G0199900 N 0.000
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.000
ONIVA06G27990 Oryza nivara ONIVA06G27990 N 0.000
OS02G0139400 Oryza sativa OS02G0139400 N 0.000
SPL11 Oryza sativa OS06G0663500 N 0.000
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.000
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.000
Si017749m.g Setaria italica Si017749m.g N 0.000
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.000
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.000
mgf010397m Mimulus guttatus mgf010397m N 0.000
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.000
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.000
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.000
BGIOSGA020731 Oryza indica BGIOSGA020731 N 0.000
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.000
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.000
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.000
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.000
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.000
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.000
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.000
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.000
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.000
LPERR06G19770 Leersia perrieri LPERR06G19770 N 0.000
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.000
OB02G12930 Oryza brachyantha OB02G12930 N 0.000
OBART02G03260 Oryza barthii OBART02G03260 N 0.000
OBART06G23820 Oryza barthii OBART06G23820 N 0.000
OGLUM06G25070 Oryza glumaepatula OGLUM06G25070 N 0.000
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.000
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.000
OMERI06G23750 Oryza meridionalis OMERI06G23750 N 0.000
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.000
SPL3 Oryza indica BGIOSGA007499 N 0.000
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.000