MTR_1g103190 (Medicago truncatula)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 MTR_1g103190 T345563_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.187
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.184
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.184
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.171
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.171
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.158
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.158
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.158
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.158
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.147
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.141
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.135
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.133
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.133
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.133
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.133
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.133
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.133
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.133
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.132
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.120
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.120
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.108
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.107
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.107
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.107
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.107
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.107
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH43825 TCR/CxC 197 219

Links

Other TCR/CxC family TFs
Other Medicago truncatula TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI009013 Acyrthosiphon pisum ACYPI009013 D
retn Drosophila melanogaster FBgn0004795 D
ACYPI34394 Acyrthosiphon pisum ACYPI34394 I
AGAP005156 Anopheles gambiae AGAP005156 I
CapteG64285 Capitella teleta CapteG64285 I
CGI_10006980 Crassostrea gigas CGI_10006980 I
DAPPUDRAFT_3993 Daphnia pulex DAPPUDRAFT_3993 I
ARID3B Oryctolagus cuniculus ENSOCUG00000025077 I
ARID3B Ochotona princeps ENSOPRG00000002281 I
GA18855 Drosophila pseudoobscura FBgn0078855 I
GF13069 Drosophila ananassae FBgn0090102 I
GG22872 Drosophila erecta FBgn0115029 I
GH20664 Drosophila grimshawi FBgn0128127 I
GI19027 Drosophila mojavensis FBgn0141766 I
GL16874 Drosophila persimilis FBgn0154478 I
GM16032 Drosophila sechellia FBgn0170948 I
GD11780 Drosophila simulans FBgn0183519 I
GJ19993 Drosophila virilis FBgn0207134 I
GK23065 Drosophila willistoni FBgn0225027 I
GE14310 Drosophila yakuba FBgn0231925 I
GB55596 Apis mellifera GB55596 I
ISCW014189 Ixodes scapularis ISCW014189 I
KGM_11440 Danaus plexippus KGM_11440 I
LotgiG93934 Lottia gigantea LotgiG93934 I
NV17632 Nasonia vitripennis NV17632 I
SMAR003184 Strigamia maritima SMAR003184 I
SMAR006121 Strigamia maritima SMAR006121 I
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I
TC008720 Tribolium castaneum TC008720 I
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I
LDEC011073 Leptinotarsa decemlineata LDEC011073 I
SMU15014499 Schmidtea mediterranea SMU15014499 I
BGLB000541 Biomphalaria glabrata BGLB000541 I
MDOA006752 Musca domestica MDOA006752 I
ECANG7_05318 Echinococcus canadensis ECANG7_05318 I
ECANG7_06547 Echinococcus canadensis ECANG7_06547 I
EmuJ_000964700 Echinococcus multilocularis EmuJ_000964700 I
HDID_0000342501 Hymenolepis diminuta HDID_0000342501 I
HmN_000157800 Hymenolepis microstoma HmN_000157800 I
HmN_000451100 Hymenolepis microstoma HmN_000451100 I
HNAJ_0000082601 Hymenolepis nana HNAJ_0000082601 I
MCOS_0000539101 Mesocestoides corti MCOS_0000539101 I
SSLN_0000405401 Schistocephalus solidus SSLN_0000405401 I
TsM_000440000 Taenia solium TsM_000440000 I
TsM_000529300 Taenia solium TsM_000529300 I
TTAC_0000915101 Hydatigera taeniaeformis TTAC_0000915101 I
CpipJ_CPIJ010152 Culex pipiens CpipJ_CPIJ010152 N
AAEL017280 Aedes aegypti AAEL017280 N
ACEP26642 Atta cephalotes ACEP26642 N
ACYPI006497 Acyrthosiphon pisum ACYPI006497 N
ADAC008556 Anopheles darlingi ADAC008556 N
AGAP001786 Anopheles gambiae AGAP001786 N
BGIBMGA010273 Bombyx mori BGIBMGA010273 N
CPIJ010152 Culex quinquefasciatus CPIJ010152 N
DAPPUDRAFT_327651 Daphnia pulex DAPPUDRAFT_327651 N
osa Drosophila yakuba FBgn0041640 N
GF23141 Drosophila ananassae FBgn0100135 N
GG16758 Drosophila erecta FBgn0108988 N
GH15872 Drosophila grimshawi FBgn0123343 N
GI23637 Drosophila mojavensis FBgn0146363 N
GM15347 Drosophila sechellia FBgn0170267 N
GJ24712 Drosophila virilis FBgn0211788 N
GK22507 Drosophila willistoni FBgn0224484 N
GA26236 Drosophila pseudoobscura FBgn0247610 N
osa Drosophila melanogaster FBgn0261885 N
GB44899 Apis mellifera GB44899 N
KGM_12579 Danaus plexippus KGM_12579 N
NV21537 Nasonia vitripennis NV21537 N
PHUM080380 Pediculus humanus PHUM080380 N
RPRC005301 Rhodnius prolixus RPRC005301 N
SINV22763 Solenopsis invicta SINV22763 N
Smp_156170 Schistosoma mansoni Smp_156170 N
TC013586 Tribolium castaneum TC013586 N
tetur02g14160 Tetranychus urticae tetur02g14160 N
YQE_09239 Dendroctonus ponderosae YQE_09239 N
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N
CLEC012210 Cimex lectularius CLEC012210 N
HHAL005964-PA Halyomorpha halys HHAL005964-PA N
LCUP015823 Lucilia cuprina LCUP015823 N
Sjc_0060650 Schistosoma japonicum Sjc_0060650 N
SMU15017366 Schmidtea mediterranea SMU15017366 N
SMU15033702 Schmidtea mediterranea SMU15033702 N
AALB003072 Anopheles albimanus AALB003072 N
AARA000452 Anopheles arabiensis AARA000452 N
AATE006796 Anopheles atroparvus AATE006796 N
ACHR005336 Anopheles christyi ACHR005336 N
ACUA025715 Anopheles culicifacies ACUA025715 N
ADIR002498 Anopheles dirus ADIR002498 N
AEPI003661 Anopheles epiroticus AEPI003661 N
AFAF010393 Anopheles farauti AFAF010393 N
AFUN009891 Anopheles funestus AFUN009891 N
AMAM004700 Anopheles maculatus AMAM004700 N
AMEC021754 Anopheles melas AMEC021754 N
AMEM013442 Anopheles merus AMEM013442 N
AMIN000696 Anopheles minimus AMIN000696 N
AQUA004105 Anopheles quadriannulatus AQUA004105 N
ASTEI11512 Anopheles stephensi ASTEI11512 N
LLOJ000864 Lutzomyia longipalpis LLOJ000864 N
MDOA004559 Musca domestica MDOA004559 N
PPAI002183 Phlebotomus papatasi PPAI002183 N
A_08377 Schistosoma haematobium A_08377 N
csin104729 Clonorchis sinensis csin104729 N
D915_06741 Fasciola hepatica D915_06741 N
DME_0001005001 Dracunculus medinensis DME_0001005001 N
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N
PXEA_0000852601 Protopolystoma xenopodis PXEA_0000852601 N
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N
SCUD_0001703701 Schistosoma curassoni SCUD_0001703701 N
SMTD_0000055001 Schistosoma mattheei SMTD_0000055001 N
T265_07301 Opisthorchis viverrini T265_07301 N