nAv.1.0.1.g01740 (Acanthocheilonema viteae)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 nAv.1.0.1.g01740 T346304_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.720
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.707
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.693
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.693
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.680
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.680
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.680
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.667
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.627
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.587
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.573
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.573
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.573
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.573
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.560
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.560
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.547
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.547
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.533
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.533
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.533
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.533
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.533
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.533
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.507
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.507
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.493
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.453
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t01740-RA TCR/CxC 248 284
nAv.1.0.1.t01740-RA TCR/CxC 324 361

Links

Other TCR/CxC family TFs
Other Acanthocheilonema viteae TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_097750 Schistosoma mansoni Smp_097750 D
cey-1 Caenorhabditis elegans WBGene00000472 D
csin111107 Clonorchis sinensis csin111107 I
HCOI01877200 Haemonchus contortus HCOI01877200 I
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I
ECPE_0001391101 Echinostoma caproni ECPE_0001391101 I
ECPE_0000786301 Echinostoma caproni ECPE_0000786301 I
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I
D918_04890 Trichuris suis D918_04890 I
D915_00091 Fasciola hepatica D915_00091 I
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I
A_06056 Schistosoma haematobium A_06056 I
LLOJ009520 Lutzomyia longipalpis LLOJ009520 I
ASTEI02878 Anopheles stephensi ASTEI02878 I
ASIS019575 Anopheles sinensis ASIS019575 I
AQUA011660 Anopheles quadriannulatus AQUA011660 I
SMTD_0001373001 Schistosoma mattheei SMTD_0001373001 I
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I
TRE_0000940901 Trichobilharzia regenti TRE_0000940901 I
TRE_0000129901 Trichobilharzia regenti TRE_0000129901 I
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I
T265_14198 Opisthorchis viverrini T265_14198 I
T265_06248 Opisthorchis viverrini T265_06248 I
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I
SROB_0000337801 Schistosoma rodhaini SROB_0000337801 I
AMIN009954 Anopheles minimus AMIN009954 I
SMTD_0000035001 Schistosoma mattheei SMTD_0000035001 I
SMRZ_0001938001 Schistosoma margrebowiei SMRZ_0001938001 I
SCUD_0000800101 Schistosoma curassoni SCUD_0000800101 I
SCUD_0000012301 Schistosoma curassoni SCUD_0000012301 I
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I
NECAME_15956 Necator americanus NECAME_15956 I
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I
HPLM_0000375501 Haemonchus placei HPLM_0000375501 I
GH16919 Drosophila grimshawi FBgn0124390 I
ISCW005281 Ixodes scapularis ISCW005281 I
HMEL008461 Heliconius melpomene HMEL008461 I
GA23502 Drosophila pseudoobscura FBgn0244903 I
GE20150 Drosophila yakuba FBgn0237472 I
GK16710 Drosophila willistoni FBgn0218712 I
GJ14010 Drosophila virilis FBgn0201228 I
GD12750 Drosophila simulans FBgn0184477 I
GM24682 Drosophila sechellia FBgn0179545 I
GL15684 Drosophila persimilis FBgn0153288 I
GI13673 Drosophila mojavensis FBgn0136428 I
Ppa-cey-1 Pristionchus pacificus PPA28011 I
GF10852 Drosophila ananassae FBgn0087892 I
yps Drosophila melanogaster FBgn0022959 I
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I
CRE01789 Caenorhabditis remanei CRE01789 I
CJA05984 Caenorhabditis japonica CJA05984 I
CBN16711 Caenorhabditis brenneri CBN16711 I
CBG02981 Caenorhabditis briggsae CBG02981 I
AGAP006108 Anopheles gambiae AGAP006108 I
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I
AARA007412 Anopheles arabiensis AARA007412 I
AMEM010049 Anopheles merus AMEM010049 I
AMEC011905 Anopheles melas AMEC011905 I
AFUN005441 Anopheles funestus AFUN005441 I
AFAF015865 Anopheles farauti AFAF015865 I
AEPI000589 Anopheles epiroticus AEPI000589 I
ADIR008587 Anopheles dirus ADIR008587 I
ACUA007180 Anopheles culicifacies ACUA007180 I
ACOM024661 Anopheles coluzzii ACOM024661 I
ACHR003797 Anopheles christyi ACHR003797 I
AATE005175 Anopheles atroparvus AATE005175 I
AAEL001375 Aedes aegypti AAEL001375 I
AALB005039 Anopheles albimanus AALB005039 I
Minc12652 Meloidogyne incognita Minc12652 I
SMU15014702 Schmidtea mediterranea SMU15014702 I
Sjc_0026800 Schistosoma japonicum Sjc_0026800 I
Sjc_0001400 Schistosoma japonicum Sjc_0001400 I
CLEC013417 Cimex lectularius CLEC013417 I
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I
Smp_097800 Schistosoma mansoni Smp_097800 I
D915_16078 Fasciola hepatica D915_16078 N
MCOS_0000610701 Mesocestoides corti MCOS_0000610701 N