CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000940901
(
Trichobilharzia regenti
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
TRE_0000940901
T165940_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_097750
M01208_2.00
Schistosoma mansoni
TAGATAGA
TCTATCTA
PBM
Lambert et al.(2019)
pTH7807
0.970
0.970
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000940901-mRNA-1
CSD
18
87
VRGVVKWFNVKAGYGFITRADTSTDIFVHQTAISRNNPGKMQRSLQENEEVEFFVVEGDKGVEASDVTGP
Links
Other
CSD
family TFs
Other
Trichobilharzia regenti
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_097750
Schistosoma mansoni
Smp_097750
D
0.970
Sjc_0026800
Schistosoma japonicum
Sjc_0026800
I
0.970
A_06056
Schistosoma haematobium
A_06056
I
0.970
SCUD_0000800101
Schistosoma curassoni
SCUD_0000800101
I
0.970
SMTD_0000035001
Schistosoma mattheei
SMTD_0000035001
I
0.970
SROB_0000337801
Schistosoma rodhaini
SROB_0000337801
I
0.970
Smp_097800
Schistosoma mansoni
Smp_097800
I
0.879
Sjc_0001400
Schistosoma japonicum
Sjc_0001400
I
0.879
SCUD_0000012301
Schistosoma curassoni
SCUD_0000012301
I
0.879
SMRZ_0001938001
Schistosoma margrebowiei
SMRZ_0001938001
I
0.879
SMTD_0001373001
Schistosoma mattheei
SMTD_0001373001
I
0.879
SROB_0000030901
Schistosoma rodhaini
SROB_0000030901
I
0.879
TRE_0000129901
Trichobilharzia regenti
TRE_0000129901
I
0.848
csin111107
Clonorchis sinensis
csin111107
I
0.773
ECPE_0000786301
Echinostoma caproni
ECPE_0000786301
I
0.773
T265_14198
Opisthorchis viverrini
T265_14198
I
0.773
CBG02981
Caenorhabditis briggsae
CBG02981
I
0.727
CBN16711
Caenorhabditis brenneri
CBN16711
I
0.727
CJA05984
Caenorhabditis japonica
CJA05984
I
0.727
CRE01789
Caenorhabditis remanei
CRE01789
I
0.727
DAPPUDRAFT_311200
Daphnia pulex
DAPPUDRAFT_311200
I
0.727
Ppa-cey-1
Pristionchus pacificus
PPA28011
I
0.727
ACAC_0000909201
Angiostrongylus cantonensis
ACAC_0000909201
I
0.727
ACOC_0000576201
Angiostrongylus costaricensis
ACOC_0000576201
I
0.727
D915_00091
Fasciola hepatica
D915_00091
I
0.727
DICVIV_10680
Dictyocaulus viviparus
DICVIV_10680
I
0.727
L889_g15794
Steinernema feltiae
L889_g15794
I
0.727
TMUE_s0011007500
Trichuris muris
TMUE_s0011007500
I
0.727
ENSMLUG00000008292
Myotis lucifugus
ENSMLUG00000008292
I
0.712
ISCW005281
Ixodes scapularis
ISCW005281
I
0.712
cey-1
Caenorhabditis elegans
WBGene00000472
D
0.712
ANCCAN_14498
Ancylostoma caninum
ANCCAN_14498
I
0.712
ANCCEY_03875
Ancylostoma ceylanicum
ANCCEY_03875
I
0.712
ANCDUO_02786
Ancylostoma duodenale
ANCDUO_02786
I
0.712
D915_16078
Fasciola hepatica
D915_16078
N
0.712
D918_04890
Trichuris suis
D918_04890
I
0.712
Hba_02103
Heterorhabditis bacteriophora
Hba_02103
I
0.712
HCOI01877200
Haemonchus contortus
HCOI01877200
I
0.712
HPBE_0000695301
Heligmosomoides bakeri
HPBE_0000695301
I
0.712
HPLM_0000375501
Haemonchus placei
HPLM_0000375501
I
0.712
L596_g21676
Steinernema carpocapsae
L596_g21676
I
0.712
L892_g19487
Steinernema scapterisci
L892_g19487
I
0.712
L893_g29692
Steinernema glaseri
L893_g29692
I
0.712
L898_g6257
Steinernema monticolum
L898_g6257
I
0.712
NBR_0000795701
Nippostrongylus brasiliensis
NBR_0000795701
I
0.712
NECAME_15956
Necator americanus
NECAME_15956
I
0.712
nRc.2.0.1.g10725
Romanomermis culicivorax
nRc.2.0.1.g10725
I
0.712
OESDEN_18169
Oesophagostomum dentatum
OESDEN_18169
I
0.712
SBAD_0000071701
Soboliphyme baturini
SBAD_0000071701
I
0.712
SVUK_0001307901
Strongylus vulgaris
SVUK_0001307901
I
0.712
T265_06248
Opisthorchis viverrini
T265_06248
I
0.712
TELCIR_06115
Teladorsagia circumcincta
TELCIR_06115
I
0.712
TTRE_0000405201
Trichuris trichiura
TTRE_0000405201
I
0.712
TCLT_0000736301
Thelazia callipaeda
TCLT_0000736301
I
0.708
CLEC013417
Cimex lectularius
CLEC013417
I
0.700