SROB_0000030901 (Schistosoma rodhaini)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 SROB_0000030901 T165899_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_097750
M01208_2.00 		Schistosoma mansoni
TAGATAGA
TCTATCTA		 PBM
Lambert et al.(2019)
pTH7807 		0.864 0.864
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000030901-mRNA-1 CSD 26 95

Links

Other CSD family TFs
Other Schistosoma rodhaini TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_097800 Schistosoma mansoni Smp_097800 I 1.000
Sjc_0001400 Schistosoma japonicum Sjc_0001400 I 1.000
SCUD_0000012301 Schistosoma curassoni SCUD_0000012301 I 1.000
SMRZ_0001938001 Schistosoma margrebowiei SMRZ_0001938001 I 1.000
SMTD_0001373001 Schistosoma mattheei SMTD_0001373001 I 1.000
TRE_0000129901 Trichobilharzia regenti TRE_0000129901 I 0.970
TRE_0000940901 Trichobilharzia regenti TRE_0000940901 I 0.879
Smp_097750 Schistosoma mansoni Smp_097750 D 0.864
Sjc_0026800 Schistosoma japonicum Sjc_0026800 I 0.864
A_06056 Schistosoma haematobium A_06056 I 0.864
ECPE_0000786301 Echinostoma caproni ECPE_0000786301 I 0.864
SCUD_0000800101 Schistosoma curassoni SCUD_0000800101 I 0.864
SMTD_0000035001 Schistosoma mattheei SMTD_0000035001 I 0.864
SROB_0000337801 Schistosoma rodhaini SROB_0000337801 I 0.864
csin111107 Clonorchis sinensis csin111107 I 0.848
T265_14198 Opisthorchis viverrini T265_14198 I 0.848
D915_00091 Fasciola hepatica D915_00091 I 0.803
D915_16078 Fasciola hepatica D915_16078 N 0.788
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.758
T265_06248 Opisthorchis viverrini T265_06248 I 0.758
CLEC013417 Cimex lectularius CLEC013417 I 0.750
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.742
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I 0.742
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.742
AALB005039 Anopheles albimanus AALB005039 I 0.742
ADIR008587 Anopheles dirus ADIR008587 I 0.742
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.742
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.742
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.742
ECPE_0001391101 Echinostoma caproni ECPE_0001391101 I 0.742
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.742
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I 0.742
AAEL001375 Aedes aegypti AAEL001375 I 0.727
AGAP006108 Anopheles gambiae AGAP006108 I 0.727
CBG02981 Caenorhabditis briggsae CBG02981 I 0.727
CBN16711 Caenorhabditis brenneri CBN16711 I 0.727
CJA05984 Caenorhabditis japonica CJA05984 I 0.727
CRE01789 Caenorhabditis remanei CRE01789 I 0.727
ISCW005281 Ixodes scapularis ISCW005281 I 0.727
Minc12652 Meloidogyne incognita Minc12652 I 0.727
AARA007412 Anopheles arabiensis AARA007412 I 0.727
ACHR003797 Anopheles christyi ACHR003797 I 0.727
ACOM024661 Anopheles coluzzii ACOM024661 I 0.727
ACUA007180 Anopheles culicifacies ACUA007180 I 0.727
AEPI000589 Anopheles epiroticus AEPI000589 I 0.727
AFUN005441 Anopheles funestus AFUN005441 I 0.727
AMEC011905 Anopheles melas AMEC011905 I 0.727
AMEM010049 Anopheles merus AMEM010049 I 0.727
AMIN009954 Anopheles minimus AMIN009954 I 0.727
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.727
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.727
LLOJ009520 Lutzomyia longipalpis LLOJ009520 I 0.727
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I 0.727
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I 0.727
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I 0.727
D918_04890 Trichuris suis D918_04890 I 0.727
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.727
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.727
HCOI01877200 Haemonchus contortus HCOI01877200 I 0.727
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.727
HPLM_0000375501 Haemonchus placei HPLM_0000375501 I 0.727
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I 0.727
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.727
NECAME_15956 Necator americanus NECAME_15956 I 0.727
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I 0.727
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I 0.727
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.727
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.727
yps Drosophila melanogaster FBgn0022959 I 0.712
GF10852 Drosophila ananassae FBgn0087892 I 0.712
GH16919 Drosophila grimshawi FBgn0124390 I 0.712
GI13673 Drosophila mojavensis FBgn0136428 I 0.712
GL15684 Drosophila persimilis FBgn0153288 I 0.712
GM24682 Drosophila sechellia FBgn0179545 I 0.712
GD12750 Drosophila simulans FBgn0184477 I 0.712
GJ14010 Drosophila virilis FBgn0201228 I 0.712
GK16710 Drosophila willistoni FBgn0218712 I 0.712
GE20150 Drosophila yakuba FBgn0237472 I 0.712
GA23502 Drosophila pseudoobscura FBgn0244903 I 0.712
HMEL008461 Heliconius melpomene HMEL008461 I 0.712
cey-1 Caenorhabditis elegans WBGene00000472 D 0.712
SMU15014702 Schmidtea mediterranea SMU15014702 I 0.712
AATE005175 Anopheles atroparvus AATE005175 I 0.712
AFAF015865 Anopheles farauti AFAF015865 I 0.712
ASIS019575 Anopheles sinensis ASIS019575 I 0.712
MCOS_0000610701 Mesocestoides corti MCOS_0000610701 N 0.712