CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000003697
(
Pongo abelii
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05485 (THAP)
IPR006612
ENSPPYG00000003697
T348639_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
THAP12
M02538_2.00
Homo sapiens
NNNYMBNNBGRN
NYCVNNVKRNNN
PBM
Weirauch et al.(2014)
pTH9190
1.000
1.000
THAP12
M02539_2.00
Gallus gallus
NBNYCKGKMNNN
NNNKMCMGRNVN
PBM
Weirauch et al.(2014)
pTH8688
0.937
0.937
prkrirb
M02536_2.00
Danio rerio
NNMCMGMSGGNN
NNCCSKCKGKNN
PBM
Weirauch et al.(2014)
pTH8319
0.899
0.899
prkrirb
M02540_2.00
Oryzias latipes
NNBBCCGGNHN
NDNCCGGVVNN
PBM
Weirauch et al.(2014)
pTH9383
0.848
0.848
prkrirb
M02541_2.00
Tetraodon nigroviridis
CCCGCGGG
CCCGCGGG
PBM
Weirauch et al.(2014)
pTH8574
0.848
0.848
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000004225
THAP finger
4
88
FCAAPNCTRKSTQSDLAFFRFPRDPARCQKWVENCRRADLEDKTPDQLNKHYRLCAKHFETSMICRTSPYRTVLRDNAIPTIFDL
Links
Other
THAP finger
family TFs
Other
Pongo abelii
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD23
Arabidopsis thaliana
AT3G26620
D
LBD24
Arabidopsis thaliana
AT3G26660
I
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
Eucgr.A02814
Eucalyptus grandis
Eucgr.A02814
I
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
cassava11118.m1
Manihot esculenta
cassava11118.m1
I
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
POPTR_0012s13910
Populus trichocarpa
POPTR_0012s13910
I
Bra032938
Brassica rapa
Bra032938
I
Bra025217
Brassica rapa
Bra025217
I
Bo7g083780
Brassica oleracea
Bo7g083780
I
Bo3g065910
Brassica oleracea
Bo3g065910
I
Bo00285s360
Brassica oleracea
Bo00285s360
I
TCM_035123
Theobroma cacao
TCM_035123
N