CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00024p00159910
(
Amborella trichopoda
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
AMTR_s00024p00159910
T350674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.756
0.756
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN11116
WRC
178
218
GGSQCSRMNGRGWRCNQQTLVGYALCEHHLGKGRMKSINGI
Links
Other
WRC
family TFs
Other
Amborella trichopoda
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_08438
Capronia epimyces
A1O3_08438
N
A1O5_11821
Cladophialophora psammophila
A1O5_11821
N
A1O7_01135
Cladophialophora yegresii
A1O7_01135
N
A1O9_11923
Exophiala aquamarina
A1O9_11923
N
G647_01193
Cladophialophora carrionii
G647_01193
N
PV04_00852
Capronia semiimmersa
PV04_00852
N
PV06_10667
Exophiala oligosperma
PV06_10667
N
PV07_06399
Cladophialophora immunda
PV07_06399
N
PV08_05094
Exophiala spinifera
PV08_05094
N
PV10_02780
Exophiala mesophila
PV10_02780
N
PV11_10218
Exophiala sideris
PV11_10218
N
Z519_01928
Cladophialophora bantiana
Z519_01928
N