Cucsa.117300 (Cucumis sativus)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Cucsa.117300 T351467_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.860 0.860
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.117300.1 WRC 80 122
Cucsa.117300.2 WRC 80 122

Links

Other WRC family TFs
Other Cucumis sativus TFs

576 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_03857 Verticillium albo atrum VDBG_03857 N
CFIO01_01590 Colletotrichum fioriniae CFIO01_01590 N
CH063_03168 Colletotrichum higginsianum CH063_03168 N
Cob_11179 Colletotrichum orbiculare Cob_11179 N
CSUB01_09602 Colletotrichum sublineola CSUB01_09602 N
GLRG_00561 Colletotrichum graminicola GLRG_00561 N
VDAG_01084 Verticillium dahliae VDAG_01084 N
VDBG_03857 Verticillium alfalfae VDBG_03857 N