Cagra.13389s0020 (Capsella grandiflora)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Cagra.13389s0020 T351561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.13389s0020.1.p WRC 156 197

Links

Other WRC family TFs
Other Capsella grandiflora TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-11 Caenorhabditis elegans WBGene00001955 D
crp Drosophila melanogaster FBgn0001994 D
HPBE_0002474001 Heligmosomoides bakeri HPBE_0002474001 I
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I
MDOA012071 Musca domestica MDOA012071 I
ACAC_0001093601 Angiostrongylus cantonensis ACAC_0001093601 I
ACOC_0000846801 Angiostrongylus costaricensis ACOC_0000846801 I
ANCCAN_04319 Ancylostoma caninum ANCCAN_04319 I
ANCCEY_00577 Ancylostoma ceylanicum ANCCEY_00577 I
CGOC_0000858101 Cylicostephanus goldi CGOC_0000858101 I
DICVIV_02775 Dictyocaulus viviparus DICVIV_02775 I
GPLIN_000941800 Globodera pallida GPLIN_000941800 I
HCOI01121900 Haemonchus contortus HCOI01121900 I
PPA14541 Pristionchus pacificus PPA14541 I
HPLM_0001857601 Haemonchus placei HPLM_0001857601 I
NBR_0000263101 Nippostrongylus brasiliensis NBR_0000263101 I
NBR_0000299801 Nippostrongylus brasiliensis NBR_0000299801 I
NECAME_04511 Necator americanus NECAME_04511 I
scaffold60-EXSNAP2012.12 Pristionchus exspectatus scaffold60-EXSNAP2012.12 I
SVUK_0000451101 Strongylus vulgaris SVUK_0000451101 I
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I
TELCIR_07248 Teladorsagia circumcincta TELCIR_07248 I
TELCIR_11314 Teladorsagia circumcincta TELCIR_11314 I
GL14101 Drosophila persimilis FBgn0151706 I
BGIBMGA010353 Bombyx mori BGIBMGA010353 I
CBG10034 Caenorhabditis briggsae CBG10034 I
CJA09019 Caenorhabditis japonica CJA09019 I
CRE25281 Caenorhabditis remanei CRE25281 I
GA20511 Drosophila pseudoobscura FBgn0080505 I
GF21721 Drosophila ananassae FBgn0098721 I
GG24179 Drosophila erecta FBgn0116312 I
GH10096 Drosophila grimshawi FBgn0117577 I
GI14377 Drosophila mojavensis FBgn0137129 I
AGAP010201 Anopheles gambiae AGAP010201 I
GM17917 Drosophila sechellia FBgn0172824 I
GD21926 Drosophila simulans FBgn0193342 I
GJ16254 Drosophila virilis FBgn0203439 I
GK24289 Drosophila willistoni FBgn0226250 I
GE19372 Drosophila yakuba FBgn0236717 I
GB48999 Apis mellifera GB48999 I
HMEL008759 Heliconius melpomene HMEL008759 I
KGM_15765 Danaus plexippus KGM_15765 I
L798_07621 Zootermopsis nevadensis L798_07621 I