CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g095820
(
Brassica oleracea
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Bo2g095820
T352095_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.855
0.780
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.837
0.644
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.836
0.627
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g095820.1
WRKY
100
160
NDGFSWRKYGQKKIKTSSHQRCYYRCAYAKDRNCNATKRVQQIQNSPSVYRTTYVGKHICE
Links
Other
WRKY
family TFs
Other
Brassica oleracea
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hr83
Drosophila melanogaster
FBgn0037436
D
AFUN005541
Anopheles funestus
AFUN005541
I
tetur01g07700
Tetranychus urticae
tetur01g07700
I
Hsal_03084--XP_001121181.1_APIME
Harpegnathos saltator
Hsal_03084--XP_001121181.1_APIME
I
Ocbimv22005486m.g
Octopus bimaculoides
Ocbimv22005486m.g
I
Sakowv30002570m.g
Saccoglossus kowalevskii
Sakowv30002570m.g
I
LCUP007875
Lucilia cuprina
LCUP007875
I
SMU15015045
Schmidtea mediterranea
SMU15015045
I
XP_002156561.1
Hydra magnipapillata
XP_002156561.1
I
AALB009657
Anopheles albimanus
AALB009657
I
AARA006703
Anopheles arabiensis
AARA006703
I
AATE004130
Anopheles atroparvus
AATE004130
I
AEPI004731
Anopheles epiroticus
AEPI004731
I
SPU_012586
Strongylocentrotus purpuratus
SPU_012586
I
AMAM005986
Anopheles maculatus
AMAM005986
I
AMEC011506
Anopheles melas
AMEC011506
I
AMEM012481
Anopheles merus
AMEM012481
I
AMIN000835
Anopheles minimus
AMIN000835
I
AQUA004261
Anopheles quadriannulatus
AQUA004261
I
ASTEI03427
Anopheles stephensi
ASTEI03427
I
LLOJ000718
Lutzomyia longipalpis
LLOJ000718
I
LLOJ001302
Lutzomyia longipalpis
LLOJ001302
I
MDOA009347
Musca domestica
MDOA009347
I
PPAI010314
Phlebotomus papatasi
PPAI010314
I
GM10889
Drosophila sechellia
FBgn0165835
I
HR83
Aedes aegypti
AAEL007350
I
ACYPI48102
Acyrthosiphon pisum
ACYPI48102
I
AGAP002234
Anopheles gambiae
AGAP002234
I
CapteG177303
Capitella teleta
CapteG177303
I
CPIJ015933
Culex quinquefasciatus
CPIJ015933
I
GA10225
Drosophila pseudoobscura
FBgn0070284
I
GF16659
Drosophila ananassae
FBgn0093680
I
GG13368
Drosophila erecta
FBgn0105640
I
GH18089
Drosophila grimshawi
FBgn0125557
I
GI24589
Drosophila mojavensis
FBgn0147311
I
GL22067
Drosophila persimilis
FBgn0159659
I
TC010460
Tribolium castaneum
TC010460
I
GD19868
Drosophila simulans
FBgn0191357
I
GJ22654
Drosophila virilis
FBgn0209758
I
GE10213
Drosophila yakuba
FBgn0228087
I
HelroG148423
Helobdella robusta
HelroG148423
I
ISCW008659
Ixodes scapularis
ISCW008659
I
L798_08383
Zootermopsis nevadensis
L798_08383
I
LotgiG132791
Lottia gigantea
LotgiG132791
I
NV10871
Nasonia vitripennis
NV10871
I
SMAR006023
Strigamia maritima
SMAR006023
I
CpipJ_CPIJ015933
Culex pipiens
CpipJ_CPIJ015933
I