PGSC0003DMG401005575 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG401005575 T354316_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.849 0.783
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.840 0.774
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.853 0.826
WRKY20
M07414_2.00 		Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD		 Dap-seq
OMalley et al.(2016)
WRKY20_col_a 		0.844 0.765
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.833 0.765
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.831 0.704
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.831 0.704
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.828 0.757
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.828 0.757
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.826 0.626
WRKY25
M02552_2.00 		Arabidopsis thaliana
YRGTCAAM
KTTGACYR		 PBM
Weirauch et al.(2014)
pTH8810 		0.835 0.696
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.826 0.626
WRKY25
M07387_2.00 		Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD		 Dap-seq
OMalley et al.(2016)
WRKY25_col_a 		0.835 0.696
WRKY25
M07388_2.00 		Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a 		0.835 0.696
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014220 WRKY 224 280
PGSC0003DMT400014220 WRKY 398 461
PGSC0003DMT400014221 WRKY 224 280
PGSC0003DMT400014221 WRKY 398 455

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

775 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NFKB1 Homo sapiens ENSG00000109320 D
Nfkb1 Mus musculus ENSMUSG00000028163 D
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I
NFKB1 Tupaia belangeri ENSTBEG00000003520 I
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I
NFKB1 Sus scrofa ENSSSCG00000030957 I
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I
NFKB1 Pan troglodytes ENSPTRG00000016320 I
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I
NFKB1 Procavia capensis ENSPCAG00000008172 I
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I
NFKB1 Ochotona princeps ENSOPRG00000005212 I
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I
NFKB1 Otolemur garnettii ENSOGAG00000012840 I
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I
NFKB1 Tursiops truncatus ENSTTRG00000010852 I
NFKB1 Vicugna pacos ENSVPAG00000000280 I
Aan_R012729 Calypte anna Aan_R012729 I
Afo_R015662 Aptenodytes forsteri Afo_R015662 I
Alligator_sinensis_CCG005309.1 Alligator sinensis Alligator_sinensis_CCG005309.1 I
Brh_R011794 Buceros rhinoceros Brh_R011794 I
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I
ENSP00000226574 Macaca fascicularis ENSP00000226574 I
Gfo_R000994 Geospiza fortis Gfo_R000994 I
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I
Ogr10707 Ophisaurus gracilis Ogr10707 I
Tal_R004861 Tyto alba Tal_R004861 I
nfkb1 Xenopus tropicalis XB-GENE-985746 I
nfkb1.L Xenopus laevis XB-GENE-985749 I
NFKB1 Gorilla gorilla ENSGGOG00000009071 I
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I
NFKB1 Bos taurus ENSBTAG00000020270 I
NFKB1 Canis familiaris ENSCAFG00000010730 I
NFKB1 Callithrix jacchus ENSCJAG00000015382 I
NFKB1 Cavia porcellus ENSCPOG00000007789 I
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I
nfkb1 Danio rerio ENSDARG00000105261 I
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I
Nfkb1 Dipodomys ordii ENSDORG00000007447 I
NFKB1 Equus caballus ENSECAG00000015042 I
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I
NFKB1 Felis catus ENSFCAG00000007557 I
NFKB1 Gallus gallus ENSGALG00000012304 I
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I
NFKB1 Loxodonta africana ENSLAFG00000009344 I
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I
NFKB1 Myotis lucifugus ENSMLUG00000005986 I
NFKB1 Macaca mulatta ENSMMUG00000003736 I
NFKB1 Monodelphis domestica ENSMODG00000020672 I
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I
ENSGMOG00000007506 Gadus morhua ENSGMOG00000007506 N