CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Si038537m.g *(Setaria italica)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	Si038537m.g	T354738_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.893	0.864
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.893	0.864
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.889	0.949
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.889	0.949
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.889	0.949
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.888	0.797
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.888	0.797
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.888	0.797
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.885	0.814
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.885	0.814
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.885	0.814
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.869	0.763
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.869	0.763
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.869	0.763
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.869	0.695
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.869	0.695
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.869	0.695
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.862	0.678
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.862	0.678
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.862	0.678
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.857	0.678
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.857	0.678
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.857	0.661
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.854	0.627
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.854	0.627
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.854	0.627
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.850	0.610
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.850	0.610
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.850	0.610
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.836	0.559
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.833	0.559
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.832	0.559
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.832	0.559
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.832	0.559
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.832	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.832	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.828	0.576
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.821	0.525
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.821	0.525
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.821	0.525
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.815	0.492
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.811	0.492
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Si038537m	WRKY	179	237	SDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPSMLVITYTSDHNHP

Links
Other WRKY family TFs
Other *Setaria italica* TFs

1611 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
SIP4	Saccharomyces cerevisiae	YJL089W	D
CPAG_00982	Candida parapsilosis	CPAG_00982	I
MGU_03419	Metarhizium guizhouense	MGU_03419	I
Mycgr3G66501	Zymoseptoria tritici	Mycgr3G66501	I
PAS_chr4_0540	Komagataella pastoris	PAS_chr4_0540	I
PICST_31755	Scheffersomyces stipitis	PICST_31755	I
PICST_622	Scheffersomyces stipitis	PICST_622	I
SPAPADRAFT_154694	Spathaspora passalidarum	SPAPADRAFT_154694	I
SS1G_10339	Sclerotinia sclerotiorum	SS1G_10339	I
SU7_1759	Saccharomyces arboricola	SU7_1759	I
TDEL_0D01450	Torulaspora delbrueckii	TDEL_0D01450	I
TPHA_0I02820	Tetrapisispora phaffii	TPHA_0I02820	I
TRIATDRAFT_221379	Trichoderma atroviride	TRIATDRAFT_221379	I
X797_003538	Metarhizium robertsii	X797_003538	I
YALI0_C19151g	Yarrowia lipolytica	YALI0_C19151g	I
ZBAI_02613	Zygosaccharomyces bailii	ZBAI_02613	I
ZBAI_07009	Zygosaccharomyces bailii	ZBAI_07009	I
ZYRO0G15136g	Zygosaccharomyces rouxii	ZYRO0G15136g	I
estExt_Genewise1Plus.C_chr_12372	Mycosphaerella graminicola	estExt_Genewise1Plus.C_chr_12372	I
fgenesh1_pg.C_chr_4.1000626	Pichia stipitis	fgenesh1_pg.C_chr_4.1000626	I
gwh1.2.1.110.1	Pichia stipitis	gwh1.2.1.110.1	I
11616_YJL089W	Saccharomyces paradoxus	11616_YJL089W	I
11867_YJL089W	Saccharomyces mikatae	11867_YJL089W	I
12726_YJL089W	Saccharomyces bayanus	12726_YJL089W	I
KLTH0D03564g	Kluyveromyces thermotolerans	KLTH0D03564g	I
SAKL0D05654g	Lachancea kluyveri	SAKL0D05654g	I
XP_002493979.1	Pichia pastoris	XP_002493979.1	I
GNLVRS01_PISO0I17586g	Millerozyma farinosa	GNLVRS01_PISO0I17586g	I
CPAG_01919	Candida parapsilosis	CPAG_01919	I
AACERI_AaceriAFR096W	Saccharomycetaceae sp ashbya aceri	AACERI_AaceriAFR096W	I
AGOS_AFR096W	Ashbya gossypii	AGOS_AFR096W	I
Bcin14g04080	Botrytis cinerea	Bcin14g04080	I
CAGL0L03377g	Candida glabrata	CAGL0L03377g	I
CFIO01_04476	Colletotrichum fioriniae	CFIO01_04476	I
CORT_0A06750	Candida orthopsilosis	CORT_0A06750	I
CORT_0B04760	Candida orthopsilosis	CORT_0B04760	I
DEHA2G02090g	Debaryomyces hansenii	DEHA2G02090g	I
DOTSEDRAFT_67755	Dothistroma septosporum	DOTSEDRAFT_67755	I
Ecym_6340	Eremothecium cymbalariae	Ecym_6340	I
MBR_08248	Metarhizium brunneum	MBR_08248	I
GNLVRS01_PISO0J19347g	Millerozyma farinosa	GNLVRS01_PISO0J19347g	I
GNLVRS01_PISO0K20118g	Millerozyma farinosa	GNLVRS01_PISO0K20118g	I
GNLVRS01_PISO0L20119g	Millerozyma farinosa	GNLVRS01_PISO0L20119g	I
KAFR_0A01480	Kazachstania africana	KAFR_0A01480	I
KLLA0_D01452g	Kluyveromyces lactis	KLLA0_D01452g	I
KLLA0_F14322g	Kluyveromyces lactis	KLLA0_F14322g	I
KLTH0D03564g	Lachancea thermotolerans	KLTH0D03564g	I
Kpol_1016p20	Vanderwaltozyma polyspora	Kpol_1016p20	I
KUCA_T00004675001	Kuraishia capsulata	KUCA_T00004675001	I
LELG_00667	Lodderomyces elongisporus	LELG_00667	I
LELG_01997	Lodderomyces elongisporus	LELG_01997	I
MANI_028841	Metarhizium anisopliae	MANI_028841	I
PGUG_00677	Meyerozyma guilliermondii	PGUG_00677	N
e_gw1.4.1243.1	Cryphonectria parasitica	e_gw1.4.1243.1	N
PGUG_00677	Candida guilliermondii	PGUG_00677	N

Si038537m.g (Setaria italica) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1611 Related TFs

Si038537m.g **(Setaria italica)
WRKY**