CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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11616_YJL089W
(
Saccharomyces paradoxus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
11616_YJL089W
T390737_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN
NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.676
0.974
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD
HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.676
0.974
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.676
0.974
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR
YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.676
0.974
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.676
0.974
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN
NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.545
0.590
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN
NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.545
0.590
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN
NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.545
0.590
CAT8
M11485_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.545
0.590
CAT8
M11486_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.545
0.590
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.540
0.538
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.540
0.538
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.540
0.513
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
11616_YJL089W
Zinc cluster
44
83
HACDRCRLKKIKCDGLKPKCSNCAKIDFPCKTSDKLSRRG
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces paradoxus
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SIP4
Saccharomyces cerevisiae
YJL089W
D
0.676
SU7_1759
Saccharomyces arboricola
SU7_1759
I
0.658
SKUD_164001
Saccharomyces kudriavzevii
SKUD_164001
I
0.651
11867_YJL089W
Saccharomyces mikatae
11867_YJL089W
I
0.651
12726_YJL089W
Saccharomyces bayanus
12726_YJL089W
I
0.651
CAGL0L03377g
Candida glabrata
CAGL0L03377g
I
0.600
ZBAI_02613
Zygosaccharomyces bailii
ZBAI_02613
I
0.587
ZBAI_07009
Zygosaccharomyces bailii
ZBAI_07009
I
0.587
GNLVRS01_PISO0I17586g
Millerozyma farinosa
GNLVRS01_PISO0I17586g
I
0.583
GNLVRS01_PISO0J19347g
Millerozyma farinosa
GNLVRS01_PISO0J19347g
I
0.583
KAFR_0A01480
Kazachstania africana
KAFR_0A01480
I
0.574
TDEL_0D01450
Torulaspora delbrueckii
TDEL_0D01450
I
0.568
KLLA0_D01452g
Kluyveromyces lactis
KLLA0_D01452g
I
0.566
CLUG_01305
Candida lusitaniae
CLUG_01305
I
0.562
PGUG_01292
Candida guilliermondii
PGUG_01292
I
0.562
AACERI_AaceriABL121C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABL121C
I
0.562
AGOS_ABL121C
Ashbya gossypii
AGOS_ABL121C
I
0.562
CLUG_01305
Clavispora lusitaniae
CLUG_01305
I
0.562
DEHA2F04202g
Debaryomyces hansenii
DEHA2F04202g
I
0.562
Ecym_4616
Eremothecium cymbalariae
Ecym_4616
I
0.562
KLLA0_F14322g
Kluyveromyces lactis
KLLA0_F14322g
I
0.562
KLTH0C03762g
Lachancea thermotolerans
KLTH0C03762g
I
0.562
Kpol_1016p20
Vanderwaltozyma polyspora
Kpol_1016p20
I
0.562
LALA0_S03e00276g
Lachancea lanzarotensis
LALA0_S03e00276g
I
0.562
PAS_chr2-1_0757
Komagataella pastoris
PAS_chr2-1_0757
I
0.562
PGUG_01292
Meyerozyma guilliermondii
PGUG_01292
I
0.562
TDEL_0B00530
Torulaspora delbrueckii
TDEL_0B00530
I
0.562
ZYRO0G15136g
Zygosaccharomyces rouxii
ZYRO0G15136g
I
0.562
KLTH0C03762g
Kluyveromyces thermotolerans
KLTH0C03762g
I
0.562
Kwal_10232
Kluyveromyces waltii
Kwal_10232
I
0.562
SAKL0D01342g
Lachancea kluyveri
SAKL0D01342g
I
0.562
XP_002491690.1
Pichia pastoris
XP_002491690.1
I
0.562
KLTH0D03564g
Lachancea thermotolerans
KLTH0D03564g
I
0.559
KLTH0D03564g
Kluyveromyces thermotolerans
KLTH0D03564g
I
0.559
MANI_028841
Metarhizium anisopliae
MANI_028841
I
0.548
MBR_08248
Metarhizium brunneum
MBR_08248
I
0.548
MGU_03419
Metarhizium guizhouense
MGU_03419
I
0.548
X797_003538
Metarhizium robertsii
X797_003538
I
0.548
KAFR_0B03950
Kazachstania africana
KAFR_0B03950
I
0.546
CAGL0M03025g
Candida glabrata
CAGL0M03025g
I
0.545
NCAS_0C00390
Naumovozyma castellii
NCAS_0C00390
I
0.545
NDAI_0K00390
Naumovozyma dairenensis
NDAI_0K00390
I
0.545
SKUD_207003
Saccharomyces kudriavzevii
SKUD_207003
I
0.545
TPHA_0I02820
Tetrapisispora phaffii
TPHA_0I02820
I
0.545
CAT8
Saccharomyces cerevisiae
YMR280C
D
0.545
Scas_Contig696.44
Saccharomyces castellii
Scas_Contig696.44
I
0.545
17487_YMR280C
Saccharomyces mikatae
17487_YMR280C
I
0.545
17891_YMR280C
Saccharomyces paradoxus
17891_YMR280C
I
0.545
19463_YMR280C
Saccharomyces bayanus
19463_YMR280C
I
0.545
SAKL0D05654g
Lachancea kluyveri
SAKL0D05654g
I
0.545
CPAG_00982
Candida parapsilosis
CPAG_00982
I
0.544
AACERI_AaceriAFR096W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR096W
I
0.544
AGOS_AFR096W
Ashbya gossypii
AGOS_AFR096W
I
0.544
CORT_0B04760
Candida orthopsilosis
CORT_0B04760
I
0.544
DEHA2G02090g
Debaryomyces hansenii
DEHA2G02090g
I
0.544
Ecym_6340
Eremothecium cymbalariae
Ecym_6340
I
0.544
GNLVRS01_PISO0K20118g
Millerozyma farinosa
GNLVRS01_PISO0K20118g
I
0.544
GNLVRS01_PISO0L20119g
Millerozyma farinosa
GNLVRS01_PISO0L20119g
I
0.544
LELG_01997
Lodderomyces elongisporus
LELG_01997
I
0.544
PICST_31755
Scheffersomyces stipitis
PICST_31755
I
0.544
SPAPADRAFT_154694
Spathaspora passalidarum
SPAPADRAFT_154694
I
0.544
fgenesh1_pg.C_chr_4.1000626
Pichia stipitis
fgenesh1_pg.C_chr_4.1000626
I
0.544
GGTG_08962
Gaeumannomyces graminis
GGTG_08962
I
0.543
KUCA_T00004275001
Kuraishia capsulata
KUCA_T00004275001
I
0.543
MAPG_04832
Magnaporthe poae
MAPG_04832
I
0.543
MGG_05891
Magnaporthe oryzae
MGG_05891
I
0.543
YALI0_C19151g
Yarrowia lipolytica
YALI0_C19151g
I
0.543
KUCA_T00004675001
Kuraishia capsulata
KUCA_T00004675001
I
0.542
PAS_chr4_0540
Komagataella pastoris
PAS_chr4_0540
I
0.542
XP_002493979.1
Pichia pastoris
XP_002493979.1
I
0.542
KNAG_0B01840
Kazachstania naganishii
KNAG_0B01840
I
0.541
CIMG_09602
Coccidioides immitis
CIMG_09602
I
0.540
VDBG_00686
Verticillium albo atrum
VDBG_00686
I
0.540
AOL_s00173g90
Arthrobotrys oligospora
AOL_s00173g90
I
0.540
BDDG_03989
Blastomyces dermatitidis
BDDG_03989
I
0.540
CCM_00520
Cordyceps militaris
CCM_00520
I
0.540
CGGC5_6484
Colletotrichum gloeosporioides
CGGC5_6484
I
0.540
CHGG_00728
Chaetomium globosum
CHGG_00728
I
0.540
CMQ_3248
Grosmannia clavigera
CMQ_3248
I
0.540
Cob_09661
Colletotrichum orbiculare
Cob_09661
I
0.540
CPC735_024080
Coccidioides posadasii
CPC735_024080
I
0.540
CPUR_03154
Claviceps purpurea
CPUR_03154
I
0.540
CSUB01_03093
Colletotrichum sublineola
CSUB01_03093
I
0.540
CTHT_0052680
Chaetomium thermophilum
CTHT_0052680
I
0.540
DRE_06992
Drechslerella stenobrocha
DRE_06992
I
0.540
EURHEDRAFT_525504
Aspergillus ruber
EURHEDRAFT_525504
I
0.540
F503_06102
Ophiostoma piceae uamh
F503_06102
I
0.540
FFUJ_07541
Fusarium fujikuroi
FFUJ_07541
I
0.540
FGRRES_09921
Fusarium graminearum
FGRRES_09921
D
0.540
FOXG_05502
Fusarium oxysporum
FOXG_05502
I
0.540
FPSE_03099
Fusarium pseudograminearum
FPSE_03099
I
0.540
FVEG_02639
Fusarium verticillioides
FVEG_02639
I
0.540
GLRG_10212
Colletotrichum graminicola
GLRG_10212
I
0.540
GMDG_03942
Pseudogymnoascus destructans
GMDG_03942
I
0.540
GSTUM_00005465001
Tuber melanosporum
GSTUM_00005465001
I
0.540
HCBG_02970
Histoplasma capsulatum
HCBG_02970
I
0.540
HMPREF1624_05843
Sporothrix schenckii
HMPREF1624_05843
I
0.540
MAC_01154
Metarhizium acridum
MAC_01154
I
0.540
MAJ_04331
Metarhizium majus
MAJ_04331
I
0.540
MAM_07132
Metarhizium album
MAM_07132
I
0.540
MANI_010830
Metarhizium anisopliae
MANI_010830
I
0.540
MBM_00482
Marssonina brunnea
MBM_00482
I
0.540
MBR_01591
Metarhizium brunneum
MBR_01591
I
0.540
MGU_02269
Metarhizium guizhouense
MGU_02269
I
0.540
MYCFIDRAFT_47796
Pseudocercospora fijiensis
MYCFIDRAFT_47796
I
0.540
MYCTH_2300537
Myceliophthora thermophila
MYCTH_2300537
I
0.540
NechaG41465
Fusarium solani
NechaG41465
I
0.540
NEUTE1DRAFT_127465
Neurospora tetrasperma
NEUTE1DRAFT_127465
I
0.540
OCS_05092
Ophiocordyceps sinensis
OCS_05092
I
0.540
OIDMADRAFT_40403
Oidiodendron maius
OIDMADRAFT_40403
I
0.540
PAAG_11872
Paracoccidioides sp lutzii
PAAG_11872
I
0.540
PABG_04235
Paracoccidioides brasiliensis
PABG_04235
I
0.540
PCH_Pc13g12510
Penicillium rubens
PCH_Pc13g12510
I
0.540
PDIP_26660
Penicillium digitatum
PDIP_26660
I
0.540
PEX1_082400
Penicillium expansum
PEX1_082400
I
0.540
PFICI_07248
Pestalotiopsis fici
PFICI_07248
I
0.540
PITC_056580
Penicillium italicum
PITC_056580
I
0.540
PODANS_2_2140
Podospora anserina
PODANS_2_2140
I
0.540
PVAR5_8553
Byssochlamys spectabilis
PVAR5_8553
I
0.540
S40285_06249
Stachybotrys chlorohalonata
S40285_06249
I
0.540
S40288_04897
Stachybotrys chartarum
S40288_04897
I
0.540
SEPMUDRAFT_146690
Sphaerulina musiva
SEPMUDRAFT_146690
I
0.540
SMAC_06552
Sordaria macrospora
SMAC_06552
I
0.540
SPBR_00143
Sporothrix brasiliensis
SPBR_00143
I
0.540
THITE_2106669
Thielavia terrestris
THITE_2106669
I
0.540
TRIREDRAFT_49232
Trichoderma reesei
TRIREDRAFT_49232
I
0.540
TRIVIDRAFT_166933
Trichoderma virens
TRIVIDRAFT_166933
I
0.540
U727_0043367091
Penicillium solitum
U727_0043367091
I
0.540
UCRPA7_1587
Togninia minima
UCRPA7_1587
I
0.540
UREG_04565
Uncinocarpus reesii
UREG_04565
I
0.540
UV8b_3025
Ustilaginoidea virens
UV8b_3025
I
0.540
V499_01421
Pseudogymnoascus pannorum
V499_01421
I
0.540
VDAG_00301
Verticillium dahliae
VDAG_00301
I
0.540
VDBG_00686
Verticillium alfalfae
VDBG_00686
I
0.540
VHEMI01993
Torrubiella hemipterigena
VHEMI01993
I
0.540
X797_002104
Metarhizium robertsii
X797_002104
I
0.540
e_gw1.5.1078.1
Nectria haematococca
e_gw1.5.1078.1
I
0.540
estExt_fgenesh2_pg.C_10678
Neurospora discreta
estExt_fgenesh2_pg.C_10678
I
0.540
estExt_Genewise1.C_10162
Mycosphaerella fijiensis
estExt_Genewise1.C_10162
I
0.540
acu-15
Neurospora crassa
NCU06656
D
0.540
Pc13g12510
Penicillium chrysogenum
Pc13g12510
I
0.540