SKUD_164001 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_164001 T383874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SIP4
M00089_2.00 		Saccharomyces cerevisiae
NNNNNNCSGN
NCSGNNNNNN		 PBM
Badis et al.(2008)
SIP4_2067 		0.659 0.974
SIP4
M01582_2.00 		Saccharomyces cerevisiae
NNNNNNNVVD
HBBNNNNNNN		 PBM
Zhu et al.(2009)
Sip4 		0.659 0.974
SIP4
M07516_2.00 		Saccharomyces cerevisiae
YYCGGRR
YYCCGRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1 		0.659 0.974
SIP4
M08669_2.00 		Saccharomyces cerevisiae
NCGGNYNVMYSGR
YCSRKBNRNCCGN		 Misc
DeBoer et al.(2011)
YJL089W_2067 		0.659 0.974
SIP4
M08670_2.00 		Saccharomyces cerevisiae
YYCGGRR
YYCCGRR		 Misc
DeBoer et al.(2011)
YJL089W_573 		0.659 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT44735 Zinc cluster 44 83

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SIP4 Saccharomyces cerevisiae YJL089W D 0.659
11867_YJL089W Saccharomyces mikatae 11867_YJL089W I 0.659
12726_YJL089W Saccharomyces bayanus 12726_YJL089W I 0.659
11616_YJL089W Saccharomyces paradoxus 11616_YJL089W I 0.651
SU7_1759 Saccharomyces arboricola SU7_1759 I 0.641
TDEL_0D01450 Torulaspora delbrueckii TDEL_0D01450 I 0.593
CAGL0L03377g Candida glabrata CAGL0L03377g I 0.575
KAFR_0A01480 Kazachstania africana KAFR_0A01480 I 0.574
Kpol_1016p20 Vanderwaltozyma polyspora Kpol_1016p20 I 0.570
TPHA_0I02820 Tetrapisispora phaffii TPHA_0I02820 I 0.570
DEHA2G02090g Debaryomyces hansenii DEHA2G02090g I 0.569
PAS_chr4_0540 Komagataella pastoris PAS_chr4_0540 I 0.567
XP_002493979.1 Pichia pastoris XP_002493979.1 I 0.567
KLLA0_F14322g Kluyveromyces lactis KLLA0_F14322g I 0.562
PICST_622 Scheffersomyces stipitis PICST_622 I 0.562
ZBAI_02613 Zygosaccharomyces bailii ZBAI_02613 I 0.562
ZBAI_07009 Zygosaccharomyces bailii ZBAI_07009 I 0.562
ZYRO0G15136g Zygosaccharomyces rouxii ZYRO0G15136g I 0.562
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I 0.562
CPAG_01919 Candida parapsilosis CPAG_01919 I 0.559
CORT_0A06750 Candida orthopsilosis CORT_0A06750 I 0.559
KLTH0D03564g Lachancea thermotolerans KLTH0D03564g I 0.559
LELG_00667 Lodderomyces elongisporus LELG_00667 I 0.559
KLTH0D03564g Kluyveromyces thermotolerans KLTH0D03564g I 0.559
GNLVRS01_PISO0I17586g Millerozyma farinosa GNLVRS01_PISO0I17586g I 0.558
GNLVRS01_PISO0J19347g Millerozyma farinosa GNLVRS01_PISO0J19347g I 0.558
SAKL0D05654g Lachancea kluyveri SAKL0D05654g I 0.553
PGUG_00677 Candida guilliermondii PGUG_00677 N 0.548
MANI_028841 Metarhizium anisopliae MANI_028841 I 0.548
MBR_08248 Metarhizium brunneum MBR_08248 I 0.548
MGU_03419 Metarhizium guizhouense MGU_03419 I 0.548
PGUG_00677 Meyerozyma guilliermondii PGUG_00677 N 0.548
X797_003538 Metarhizium robertsii X797_003538 I 0.548
CPAG_00982 Candida parapsilosis CPAG_00982 I 0.544
AACERI_AaceriAFR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR096W I 0.544
AGOS_AFR096W Ashbya gossypii AGOS_AFR096W I 0.544
CORT_0B04760 Candida orthopsilosis CORT_0B04760 I 0.544
Ecym_6340 Eremothecium cymbalariae Ecym_6340 I 0.544
GNLVRS01_PISO0K20118g Millerozyma farinosa GNLVRS01_PISO0K20118g I 0.544
GNLVRS01_PISO0L20119g Millerozyma farinosa GNLVRS01_PISO0L20119g I 0.544
LELG_01997 Lodderomyces elongisporus LELG_01997 I 0.544
PICST_31755 Scheffersomyces stipitis PICST_31755 I 0.544
SPAPADRAFT_154694 Spathaspora passalidarum SPAPADRAFT_154694 I 0.544
fgenesh1_pg.C_chr_4.1000626 Pichia stipitis fgenesh1_pg.C_chr_4.1000626 I 0.544
YALI0_C19151g Yarrowia lipolytica YALI0_C19151g I 0.543
e_gw1.4.1243.1 Cryphonectria parasitica e_gw1.4.1243.1 N 0.543
KUCA_T00004675001 Kuraishia capsulata KUCA_T00004675001 I 0.542
KLLA0_D01452g Kluyveromyces lactis KLLA0_D01452g I 0.541
Bcin14g04080 Botrytis cinerea Bcin14g04080 I 0.540
CFIO01_04476 Colletotrichum fioriniae CFIO01_04476 I 0.540
DOTSEDRAFT_67755 Dothistroma septosporum DOTSEDRAFT_67755 I 0.540
Mycgr3G66501 Zymoseptoria tritici Mycgr3G66501 I 0.540
SS1G_10339 Sclerotinia sclerotiorum SS1G_10339 I 0.540
TRIATDRAFT_221379 Trichoderma atroviride TRIATDRAFT_221379 I 0.540
estExt_Genewise1Plus.C_chr_12372 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12372 I 0.540