CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb03750
(
Panicum virgatum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pavir.Bb03750
T356695_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb03750.1.p
WRKY
129
186
DDGNSWRKYGQKHIQDSPNNPRSYYRCTHKPDQGCRATRQVQASMTTRPSSSSATTAS
Links
Other
WRKY
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_008209
Oryza longistaminata
OLONG_008209
I
0.849
Pavir.Ba00227
Panicum virgatum
Pavir.Ba00227
I
0.859
TRIUR3_06813
Triticum urartu
TRIUR3_06813
I
0.819
Si030395m.g
Setaria italica
Si030395m.g
I
0.852
Sb02g043030
Sorghum bicolor
Sb02g043030
I
0.825
OS07G0680400
Oryza sativa
OS07G0680400
I
0.850
ORUFI07G27440
Oryza rufipogon
ORUFI07G27440
I
0.850
ORGLA07G0207800
Oryza glaberrima
ORGLA07G0207800
I
0.850
OPUNC07G24890
Oryza punctata
OPUNC07G24890
I
0.854
ONIVA07G26140
Oryza nivara
ONIVA07G26140
I
0.850
OMERI07G23060
Oryza meridionalis
OMERI07G23060
I
0.850
BGIOSGA023706
Oryza indica
BGIOSGA023706
I
0.850
OGLUM07G26470
Oryza glumaepatula
OGLUM07G26470
I
0.850
OBART07G26430
Oryza barthii
OBART07G26430
I
0.850
OB07G31890
Oryza brachyantha
OB07G31890
I
0.854
MLOC_78461
Hordeum vulgare
MLOC_78461
I
0.810
MLOC_74884
Hordeum vulgare
MLOC_74884
I
0.810
MLOC_74606
Hordeum vulgare
MLOC_74606
I
0.808
LPERR07G23280
Leersia perrieri
LPERR07G23280
I
0.854
GRMZM2G381378
Zea mays
GRMZM2G381378
I
0.821
F775_21933
Aegilops tauschii
F775_21933
I
0.825
F775_15928
Aegilops tauschii
F775_15928
I
0.819