CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_10091
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_10091
T358083_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_10091T0
Zinc cluster
2
30
LQCDGQSPSCGSCQRASVICVMGYSTRMS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G61970
Arabidopsis thaliana
AT1G61970
N
AT1G61980
Arabidopsis thaliana
AT1G61980
N
fgenesh2_kg.2__267__AT1G61980.1
Arabidopsis lyrata
fgenesh2_kg.2__267__AT1G61980.1
N
scaffold_200374.1
Arabidopsis lyrata
scaffold_200374.1
N
Bostr.22157s0161
Boechera stricta
Bostr.22157s0161
N
Bostr.22157s0162
Boechera stricta
Bostr.22157s0162
N
Bostr.22157s0163
Boechera stricta
Bostr.22157s0163
N
Cagra.0043s0011
Capsella grandiflora
Cagra.0043s0011
N
Cagra.0043s0012
Capsella grandiflora
Cagra.0043s0012
N
Carubv10021445m.g
Capsella rubella
Carubv10021445m.g
N
Carubv10021598m.g
Capsella rubella
Carubv10021598m.g
N